Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 RARRES2P11-201ENST00000635158 484 ntBASIC19.3■□□□□ 0.68
NDE1Q9NXR1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.29■□□□□ 0.68
NDE1Q9NXR1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 AC126544.1-201ENST00000580842 1059 ntBASIC19.29■□□□□ 0.68
NDE1Q9NXR1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 AC105233.4-201ENST00000642045 216 ntBASIC19.29■□□□□ 0.68
NDE1Q9NXR1 DPP3P2-201ENST00000416030 1696 ntBASIC19.29■□□□□ 0.68
NDE1Q9NXR1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDE1Q9NXR1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 AC233992.3-201ENST00000607491 485 ntBASIC19.28■□□□□ 0.68
NDE1Q9NXR1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NDE1Q9NXR1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NDE1Q9NXR1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.27■□□□□ 0.68
NDE1Q9NXR1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
NDE1Q9NXR1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NDE1Q9NXR1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
NDE1Q9NXR1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.27■□□□□ 0.67
NDE1Q9NXR1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NDE1Q9NXR1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NDE1Q9NXR1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
NDE1Q9NXR1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.26■□□□□ 0.67
NDE1Q9NXR1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
NDE1Q9NXR1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDE1Q9NXR1 KRT16P2-201ENST00000414673 1423 ntBASIC19.25■□□□□ 0.67
NDE1Q9NXR1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms