Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 RARRES2P4-201ENST00000514074 484 ntBASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 OR10C1-204ENST00000622521 1039 ntBASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 MKRN4P-201ENST00000444706 1521 ntBASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN28AQ9H9Z2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIN28AQ9H9Z2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LIN28AQ9H9Z2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
LIN28AQ9H9Z2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.14■□□□□ 0.66
LIN28AQ9H9Z2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LIN28AQ9H9Z2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 CDV3P1-201ENST00000471403 739 ntBASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.13■□□□□ 0.65
LIN28AQ9H9Z2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 AL355472.2-201ENST00000422958 438 ntBASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 AC098934.4-201ENST00000564127 592 ntBASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 TNXA-203ENST00000507684 2038 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms