Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 AC006058.3-201ENST00000606217 1069 ntBASIC21.31■■□□□ 1
VRTNQ9H8Y1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 AC124283.5-201ENST00000624661 1809 ntBASIC21.31■■□□□ 1
VRTNQ9H8Y1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 AC116351.2-201ENST00000606540 1585 ntBASIC21.31■■□□□ 1
VRTNQ9H8Y1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.3■■□□□ 1
VRTNQ9H8Y1 AC128676.1-201ENST00000454392 318 ntBASIC21.3■■□□□ 1
VRTNQ9H8Y1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VRTNQ9H8Y1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.3■■□□□ 1
VRTNQ9H8Y1 AC073648.6-201ENST00000641589 218 ntBASIC21.3■■□□□ 1
VRTNQ9H8Y1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.3■■□□□ 1
VRTNQ9H8Y1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VRTNQ9H8Y1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.3■■□□□ 1
VRTNQ9H8Y1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 PHGDH-210ENST00000641115 1638 ntBASIC21.29■■□□□ 1
VRTNQ9H8Y1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 AL121906.2-201ENST00000621597 723 ntBASIC21.29■■□□□ 1
VRTNQ9H8Y1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 AL691432.2-201ENST00000607222 2038 ntBASIC21.29■■□□□ 1
VRTNQ9H8Y1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.29■■□□□ 1
VRTNQ9H8Y1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
VRTNQ9H8Y1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.28■■□□□ 1
VRTNQ9H8Y1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.28■■□□□ 1
VRTNQ9H8Y1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VRTNQ9H8Y1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 AC233263.1-201ENST00000578059 224 ntBASIC21.28■■□□□ 1
VRTNQ9H8Y1 MTDHP1-201ENST00000605323 784 ntBASIC21.28■■□□□ 1
VRTNQ9H8Y1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VRTNQ9H8Y1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.28■■□□□ 1
VRTNQ9H8Y1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 TCF3P1-201ENST00000423021 1937 ntBASIC21.27■■□□□ 1
VRTNQ9H8Y1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.27■■□□□ 1
VRTNQ9H8Y1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.27■■□□□ 1
VRTNQ9H8Y1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
VRTNQ9H8Y1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.27■□□□□ 0.99
VRTNQ9H8Y1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 AL391422.3-201ENST00000603791 2761 ntBASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
VRTNQ9H8Y1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms