Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 AC005181.1-201ENST00000604782 1256 ntBASIC20■□□□□ 0.79
CCDC68Q9H2F9 AC080038.1-201ENST00000611274 1154 ntBASIC20■□□□□ 0.79
CCDC68Q9H2F9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC68Q9H2F9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC68Q9H2F9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC68Q9H2F9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC68Q9H2F9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CCDC68Q9H2F9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC68Q9H2F9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 CYP2T3P-201ENST00000601990 817 ntBASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 AC105020.6-201ENST00000621523 1217 ntBASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CCDC68Q9H2F9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 AC004911.1-201ENST00000416316 871 ntBASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC68Q9H2F9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 AL589743.5-201ENST00000616611 1050 ntBASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC68Q9H2F9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC68Q9H2F9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC68Q9H2F9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms