Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR2J3Q9H1A7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 AL691432.2-201ENST00000607222 2038 ntBASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR2J3Q9H1A7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR2J3Q9H1A7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 BX323043.1-201ENST00000641006 1765 ntBASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 MIR6821-201ENST00000617625 74 ntBASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
POLR2J3Q9H1A7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
POLR2J3Q9H1A7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR2J3Q9H1A7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR2J3Q9H1A7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.39■□□□□ 0.54
POLR2J3Q9H1A7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
POLR2J3Q9H1A7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms