Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 NBPF21P-201ENST00000425093 1451 ntBASIC20.75■□□□□ 0.91
RNF38Q9H0F5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF38Q9H0F5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 RARRES2P10-201ENST00000564312 460 ntBASIC20.74■□□□□ 0.91
RNF38Q9H0F5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 AL121906.2-201ENST00000621597 723 ntBASIC20.74■□□□□ 0.91
RNF38Q9H0F5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 AL049637.2-201ENST00000641778 930 ntBASIC20.74■□□□□ 0.91
RNF38Q9H0F5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF38Q9H0F5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 SLC25A24-204ENST00000569674 2357 ntBASIC20.73■□□□□ 0.91
RNF38Q9H0F5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 TSPY7P-201ENST00000431358 1114 ntBASIC20.73■□□□□ 0.91
RNF38Q9H0F5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF38Q9H0F5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF38Q9H0F5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 SMG8-203ENST00000578922 2178 ntBASIC20.71■□□□□ 0.91
RNF38Q9H0F5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 KRT16P5-201ENST00000455284 522 ntBASIC20.71■□□□□ 0.91
RNF38Q9H0F5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AC113410.3-201ENST00000623366 203 ntBASIC20.71■□□□□ 0.91
RNF38Q9H0F5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms