Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 NCF1B-203ENST00000435988 1254 ntBASIC18.36■□□□□ 0.53
TRIM2Q9C040 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 AC104771.1-201ENST00000603335 964 ntBASIC18.36■□□□□ 0.53
TRIM2Q9C040 AC105020.6-201ENST00000621523 1217 ntBASIC18.36■□□□□ 0.53
TRIM2Q9C040 OR10C1-204ENST00000622521 1039 ntBASIC18.36■□□□□ 0.53
TRIM2Q9C040 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
TRIM2Q9C040 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 CYP2T3P-201ENST00000601990 817 ntBASIC18.35■□□□□ 0.53
TRIM2Q9C040 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM2Q9C040 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM2Q9C040 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM2Q9C040 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM2Q9C040 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM2Q9C040 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
TRIM2Q9C040 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
TRIM2Q9C040 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRIM2Q9C040 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.33■□□□□ 0.53
TRIM2Q9C040 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM2Q9C040 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 AL109923.1-201ENST00000618799 583 ntBASIC18.33■□□□□ 0.52
TRIM2Q9C040 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 TMEM179-206ENST00000616017 1645 ntBASIC18.33■□□□□ 0.52
TRIM2Q9C040 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM2Q9C040 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms