Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 AC073912.3-201ENST00000624414 853 ntBASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.39■■□□□ 1.01
PAAF1Q9BRP4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 AF186192.3-201ENST00000583427 947 ntBASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 AP001412.1-201ENST00000608405 714 ntBASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PAAF1Q9BRP4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PAAF1Q9BRP4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 ECEL1P3-201ENST00000427961 737 ntBASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 BX088651.1-201ENST00000540551 451 ntBASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 AL355075.4-201ENST00000554988 638 ntBASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 REXO1L12P-201ENST00000622156 912 ntBASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAAF1Q9BRP4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 KRT17P2-201ENST00000300992 1314 ntBASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 AC211429.1-201ENST00000415277 523 ntBASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAAF1Q9BRP4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAAF1Q9BRP4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms