Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.46■□□□□ 0.71
EBF4Q9BQW3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.46■□□□□ 0.71
EBF4Q9BQW3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EBF4Q9BQW3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EBF4Q9BQW3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EBF4Q9BQW3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
EBF4Q9BQW3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 AL032819.2-201ENST00000624543 2162 ntBASIC19.45■□□□□ 0.7
EBF4Q9BQW3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 AL136967.2-201ENST00000623968 743 ntBASIC19.45■□□□□ 0.7
EBF4Q9BQW3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
EBF4Q9BQW3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 IRS3P-201ENST00000223076 1006 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L2-201ENST00000561772 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 AC104187.1-201ENST00000607510 612 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 AL031432.3-201ENST00000607698 485 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L6-201ENST00000626483 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L1-201ENST00000627662 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L8-201ENST00000629013 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L3-201ENST00000630187 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L7-201ENST00000630678 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 DUX4L5-201ENST00000630834 1275 ntBASIC19.44■□□□□ 0.7
EBF4Q9BQW3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EBF4Q9BQW3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 FAM21FP-204ENST00000608637 956 ntBASIC19.43■□□□□ 0.7
EBF4Q9BQW3 AL358852.1-201ENST00000623174 1268 ntBASIC19.43■□□□□ 0.7
EBF4Q9BQW3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.43■□□□□ 0.7
EBF4Q9BQW3 RBM17P2-201ENST00000616397 1405 ntBASIC19.42■□□□□ 0.7
EBF4Q9BQW3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EBF4Q9BQW3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms