Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC007322.1-201ENST00000426983 750 ntBASIC19.51■□□□□ 0.71
NPAS2Q99743 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.51■□□□□ 0.71
NPAS2Q99743 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS2Q99743 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPAS2Q99743 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS2Q99743 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.51■□□□□ 0.71
NPAS2Q99743 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS2Q99743 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPAS2Q99743 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS2Q99743 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS2Q99743 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS2Q99743 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS2Q99743 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.5■□□□□ 0.71
NPAS2Q99743 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NPAS2Q99743 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 AC005181.1-201ENST00000604782 1256 ntBASIC19.5■□□□□ 0.71
NPAS2Q99743 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 AP000974.1-201ENST00000623909 2387 ntBASIC19.5■□□□□ 0.71
NPAS2Q99743 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS2Q99743 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NPAS2Q99743 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS2Q99743 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
NPAS2Q99743 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS2Q99743 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS2Q99743 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS2Q99743 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS2Q99743 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS2Q99743 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS2Q99743 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.49■□□□□ 0.71
NPAS2Q99743 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS2Q99743 AL109923.1-201ENST00000618799 583 ntBASIC19.49■□□□□ 0.71
NPAS2Q99743 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS2Q99743 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS2Q99743 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NPAS2Q99743 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS2Q99743 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS2Q99743 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPAS2Q99743 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NPAS2Q99743 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS2Q99743 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS2Q99743 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS2Q99743 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS2Q99743 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS2Q99743 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS2Q99743 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS2Q99743 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NPAS2Q99743 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
NPAS2Q99743 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.47■□□□□ 0.71
NPAS2Q99743 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 TERF1P5-201ENST00000477545 1207 ntBASIC19.47■□□□□ 0.71
NPAS2Q99743 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.47■□□□□ 0.71
NPAS2Q99743 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
NPAS2Q99743 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.47■□□□□ 0.71
NPAS2Q99743 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS2Q99743 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.46■□□□□ 0.71
NPAS2Q99743 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms