Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CFAP54Q96N23 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 UNC93B7-201ENST00000509439 705 ntBASIC19.7■□□□□ 0.74
CFAP54Q96N23 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.7■□□□□ 0.74
CFAP54Q96N23 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.69■□□□□ 0.74
CFAP54Q96N23 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.69■□□□□ 0.74
CFAP54Q96N23 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.69■□□□□ 0.74
CFAP54Q96N23 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 AL031985.4-201ENST00000642138 673 ntBASIC19.69■□□□□ 0.74
CFAP54Q96N23 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
CFAP54Q96N23 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 COX11P1-201ENST00000489116 835 ntBASIC19.69■□□□□ 0.74
CFAP54Q96N23 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.69■□□□□ 0.74
CFAP54Q96N23 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CFAP54Q96N23 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 VENTXP5-201ENST00000523979 775 ntBASIC19.68■□□□□ 0.74
CFAP54Q96N23 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.68■□□□□ 0.74
CFAP54Q96N23 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP54Q96N23 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 AC116050.2-201ENST00000612102 1779 ntBASIC19.67■□□□□ 0.74
CFAP54Q96N23 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 HMGA1P5-201ENST00000412453 271 ntBASIC19.67■□□□□ 0.74
CFAP54Q96N23 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.67■□□□□ 0.74
CFAP54Q96N23 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP54Q96N23 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CFAP54Q96N23 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CFAP54Q96N23 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms