Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 AC009237.3-201ENST00000393279 1427 ntBASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 AC005332.8-201ENST00000622750 2735 ntBASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHMP6Q96FZ7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 BX119927.1-201ENST00000636596 1552 ntBASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP6Q96FZ7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP6Q96FZ7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP6Q96FZ7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms