Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC47A1Q96FL8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 AC004854.2-201ENST00000608450 1441 ntBASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC47A1Q96FL8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 KRT19P1-201ENST00000405746 1186 ntBASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC47A1Q96FL8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC47A1Q96FL8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SLC47A1Q96FL8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
SLC47A1Q96FL8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 SLC7A5P1-201ENST00000568957 537 ntBASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC47A1Q96FL8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC47A1Q96FL8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms