Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RBM17P1-201ENST00000453646 1190 ntBASIC20.1■□□□□ 0.81
HMGB4Q8WW32 NUDT16P1-203ENST00000513809 620 ntBASIC20.1■□□□□ 0.81
HMGB4Q8WW32 RN7SL850P-201ENST00000579959 291 ntBASIC20.1■□□□□ 0.81
HMGB4Q8WW32 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGB4Q8WW32 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 AP000525.1-201ENST00000608286 694 ntBASIC20.09■□□□□ 0.81
HMGB4Q8WW32 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 MIR6786-201ENST00000616843 113 ntBASIC20.09■□□□□ 0.81
HMGB4Q8WW32 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
HMGB4Q8WW32 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 UNC93B2-201ENST00000285383 730 ntBASIC20.08■□□□□ 0.81
HMGB4Q8WW32 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGB4Q8WW32 REXO1L10P-201ENST00000615707 1290 ntBASIC20.08■□□□□ 0.81
HMGB4Q8WW32 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HMGB4Q8WW32 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HMGB4Q8WW32 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGB4Q8WW32 PTBP1P-201ENST00000554374 1601 ntBASIC20.08■□□□□ 0.8
HMGB4Q8WW32 KRT8P20-201ENST00000423953 1409 ntBASIC20.08■□□□□ 0.8
HMGB4Q8WW32 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGB4Q8WW32 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 AC079598.2-202ENST00000546624 1451 ntBASIC20.07■□□□□ 0.8
HMGB4Q8WW32 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 CR392000.1-201ENST00000624770 1228 ntBASIC20.07■□□□□ 0.8
HMGB4Q8WW32 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 EP400NL-214ENST00000641289 2402 ntBASIC20.07■□□□□ 0.8
HMGB4Q8WW32 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGB4Q8WW32 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 MIR1238-201ENST00000408483 83 ntBASIC20.06■□□□□ 0.8
HMGB4Q8WW32 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 KRT8P9-201ENST00000558927 1449 ntBASIC20.06■□□□□ 0.8
HMGB4Q8WW32 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 AL031963.3-201ENST00000606441 850 ntBASIC20.06■□□□□ 0.8
HMGB4Q8WW32 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGB4Q8WW32 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGB4Q8WW32 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms