Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 AC008550.1-201ENST00000511500 884 ntBASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC33Q8N5R6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 AC092720.2-201ENST00000602388 1665 ntBASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 C1QBPP2-201ENST00000528754 825 ntBASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 FAM197Y4-202ENST00000622692 608 ntBASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC33Q8N5R6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 UBE2SP1-201ENST00000450587 669 ntBASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 RPPH1-201ENST00000516869 333 ntBASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 SOX15-203ENST00000570788 1093 ntBASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 AC233263.1-201ENST00000578059 224 ntBASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC33Q8N5R6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 KRT17P3-201ENST00000420566 1262 ntBASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC33Q8N5R6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms