Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL049597.2-201ENST00000565575 961 ntBASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 REXO1L10P-201ENST00000615707 1290 ntBASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 MIR2861-201ENST00000636310 90 ntBASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SYNPOQ8N3V7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 AC124283.5-201ENST00000624661 1809 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 ARMC10P1-201ENST00000313754 855 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 HLA-G-202ENST00000376815 851 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 HLA-G-203ENST00000376818 1127 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 AL031963.3-201ENST00000606441 850 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 AC244015.2-201ENST00000616358 1861 ntBASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPOQ8N3V7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 AC079598.2-202ENST00000546624 1451 ntBASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYNPOQ8N3V7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 KSR1P1-201ENST00000446298 240 ntBASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 AC116562.2-201ENST00000507042 360 ntBASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.33■□□□□ 0.85
SYNPOQ8N3V7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SYNPOQ8N3V7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 AP000525.1-201ENST00000608286 694 ntBASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNPOQ8N3V7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 KRT18P22-201ENST00000402024 1347 ntBASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms