Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AL162412.1-201ENST00000567129 965 ntBASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 TERF1P2-201ENST00000583350 1212 ntBASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AL139246.5-201ENST00000606645 996 ntBASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AP001271.2-201ENST00000624018 1556 ntBASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 KRT8P17-201ENST00000453110 1448 ntBASIC13.39□□□□□ -0.27
LINC01561Q8N1V8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 KRT19P1-201ENST00000405746 1186 ntBASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms