Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 KRT18P22-201ENST00000402024 1347 ntBASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 AC005229.4-201ENST00000610085 2198 ntBASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 AC010203.1-204ENST00000548782 407 ntBASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 WWOX-216ENST00000569818 525 ntBASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COL27A1Q8IZC6 AC011506.1-201ENST00000474329 610 ntBASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 NTF6B-201ENST00000591913 560 ntBASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 AL445675.2-201ENST00000620291 557 ntBASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 FEM1AP4-201ENST00000443167 1987 ntBASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL27A1Q8IZC6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 KRT8P17-201ENST00000453110 1448 ntBASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 AC104076.2-201ENST00000448912 469 ntBASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 AC005363.2-201ENST00000618631 242 ntBASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 MYC-208ENST00000641036 567 ntBASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
COL27A1Q8IZC6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 ECEL1P2-202ENST00000465689 757 ntBASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 AC022616.7-201ENST00000525383 220 ntBASIC18.92■□□□□ 0.62
COL27A1Q8IZC6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms