Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.217e-9■□□□□ 10
PABPN1Q86U42 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.225e-11■□□□□ 10
PABPN1Q86U42 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.247e-9■□□□□ 10
PABPN1Q86U42 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.297e-9■□□□□ 10
PABPN1Q86U42 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.425e-11■□□□□ 10
PABPN1Q86U42 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC11.24□□□□□ -0.615e-11■□□□□ 10
PABPN1Q86U42 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.765e-11■□□□□ 10
PABPN1Q86U42 UQCRC2-206ENST00000564095 542 ntTSL 49.55□□□□□ -0.887e-9■□□□□ 10
PABPN1Q86U42 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.937e-9■□□□□ 10
PABPN1Q86U42 RBM39-217ENST00000448303 1008 ntTSL 510.75□□□□□ -0.692e-8■□□□□ 10
PABPN1Q86U42 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.151e-8■□□□□ 10
PABPN1Q86U42 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC22.08■■□□□ 1.131e-8■□□□□ 10
PABPN1Q86U42 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC19.66■□□□□ 0.741e-8■□□□□ 10
PABPN1Q86U42 GRIPAP1-212ENST00000619149 2828 ntTSL 219.35■□□□□ 0.691e-8■□□□□ 10
PABPN1Q86U42 TCF25-221ENST00000568409 857 ntTSL 326.39■■□□□ 1.822e-7■□□□□ 10
PABPN1Q86U42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC43.44■■■■■ 4.551e-6■□□□□ 10
PABPN1Q86U42 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC40.59■■■■■ 4.091e-6■□□□□ 10
PABPN1Q86U42 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.074e-6■□□□□ 10
PABPN1Q86U42 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.91e-6■□□□□ 10
PABPN1Q86U42 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC38.31■■■■□ 3.721e-6■□□□□ 10
PABPN1Q86U42 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC36.05■■■■□ 3.361e-6■□□□□ 10
PABPN1Q86U42 FANCA-212ENST00000563513 571 ntTSL 435.61■■■■□ 3.292e-8■□□□□ 10
PABPN1Q86U42 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC35.57■■■■□ 3.281e-6■□□□□ 10
PABPN1Q86U42 CDC37-203ENST00000588869 966 ntTSL 534.95■■■■□ 3.191e-6■□□□□ 10
PABPN1Q86U42 FANCA-221ENST00000566889 2201 ntTSL 1 (best)34.6■■■■□ 3.132e-8■□□□□ 10
PABPN1Q86U42 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC34.23■■■■□ 3.071e-6■□□□□ 10
PABPN1Q86U42 DUS1L-213ENST00000580731 725 ntTSL 534.05■■■■□ 3.041e-6■□□□□ 10
PABPN1Q86U42 FAM136A-205ENST00000460307 2398 ntTSL 1 (best)33.25■■■□□ 2.914e-6■□□□□ 10
PABPN1Q86U42 AC129492.6-201ENST00000611383 1305 ntBASIC32.41■■■□□ 2.781e-6■□□□□ 10
PABPN1Q86U42 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC32.23■■■□□ 2.752e-8■□□□□ 10
PABPN1Q86U42 TAF15-203ENST00000603393 1214 ntTSL 1 (best)31.48■■■□□ 2.632e-8■□□□□ 10
PABPN1Q86U42 DUS1L-209ENST00000578428 688 ntTSL 230.99■■■□□ 2.551e-6■□□□□ 10
PABPN1Q86U42 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC30.61■■■□□ 2.492e-8■□□□□ 10
PABPN1Q86U42 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.441e-6■□□□□ 10
PABPN1Q86U42 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC30.11■■■□□ 2.412e-8■□□□□ 10
PABPN1Q86U42 MYBBP1A-208ENST00000573175 898 ntTSL 329.82■■■□□ 2.361e-6■□□□□ 10
PABPN1Q86U42 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC29.79■■■□□ 2.362e-8■□□□□ 10
PABPN1Q86U42 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.041e-6■□□□□ 10
PABPN1Q86U42 TMEM8A-202ENST00000424078 844 ntTSL 327.57■■■□□ 21e-6■□□□□ 10
PABPN1Q86U42 GNB2-211ENST00000469287 1702 ntTSL 226.71■■□□□ 1.871e-6■□□□□ 10
PABPN1Q86U42 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.694e-6■□□□□ 10
PABPN1Q86U42 FANCA-218ENST00000565582 812 ntTSL 324.86■■□□□ 1.572e-8■□□□□ 10
PABPN1Q86U42 AFMID-208ENST00000588800 647 ntTSL 2 BASIC23.61■■□□□ 1.372e-6■□□□□ 10
PABPN1Q86U42 MYO19-202ENST00000610576 569 ntTSL 323.48■■□□□ 1.351e-6■□□□□ 10
PABPN1Q86U42 AFMID-211ENST00000589664 754 ntTSL 522.1■■□□□ 1.132e-6■□□□□ 10
PABPN1Q86U42 AFMID-207ENST00000588199 778 ntTSL 521.53■■□□□ 1.042e-6■□□□□ 10
PABPN1Q86U42 AFMID-206ENST00000587750 541 ntTSL 321.49■■□□□ 1.032e-6■□□□□ 10
PABPN1Q86U42 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.91e-6■□□□□ 10
PABPN1Q86U42 AFMID-214ENST00000591952 582 ntTSL 2 BASIC20.08■□□□□ 0.812e-6■□□□□ 10
PABPN1Q86U42 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.778e-10■□□□□ 10
PABPN1Q86U42 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.758e-10■□□□□ 10
PABPN1Q86U42 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.318e-10■□□□□ 10
PABPN1Q86U42 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)20.7■□□□□ 0.98e-10■□□□□ 10
PABPN1Q86U42 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)19.27■□□□□ 0.688e-10■□□□□ 10
PABPN1Q86U42 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.158e-10■□□□□ 10
PABPN1Q86U42 PEG3-208ENST00000599565 318 ntTSL 314.24□□□□□ -0.138e-10■□□□□ 10
PABPN1Q86U42 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.318e-10■□□□□ 10
PABPN1Q86U42 CTSD-214ENST00000637937 1262 ntTSL 534.39■■■■□ 3.11e-12■□□□□ 10
PABPN1Q86U42 AC068580.4-204ENST00000427721 1007 ntTSL 232.68■■■□□ 2.821e-12■□□□□ 10
PABPN1Q86U42 AC068580.4-202ENST00000636579 350 ntTSL 330.84■■■□□ 2.531e-12■□□□□ 10
PABPN1Q86U42 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.431e-12■□□□□ 10
PABPN1Q86U42 CTSD-204ENST00000433655 2006 ntTSL 527.74■■■□□ 2.031e-12■□□□□ 10
PABPN1Q86U42 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.021e-12■□□□□ 10
PABPN1Q86U42 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.881e-12■□□□□ 10
PABPN1Q86U42 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.851e-12■□□□□ 10
PABPN1Q86U42 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.61e-12■□□□□ 10
PABPN1Q86U42 PKP4-205ENST00000426248 4134 ntTSL 1 (best)26.46■■□□□ 1.837e-8■□□□□ 10
PABPN1Q86U42 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.17e-8■□□□□ 10
PABPN1Q86U42 PKP4-210ENST00000480171 2772 ntTSL 213.18□□□□□ -0.37e-8■□□□□ 10
PABPN1Q86U42 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC12.31□□□□□ -0.447e-8■□□□□ 10
PABPN1Q86U42 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.527e-8■□□□□ 10
PABPN1Q86U42 MYO18A-224ENST00000636100 1564 ntTSL 549.71■■■■■ 5.552e-12■□□□□ 10
PABPN1Q86U42 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC28.77■■■□□ 2.21e-8■□□□□ 10
PABPN1Q86U42 GRAMD1A-208ENST00000598362 776 ntTSL 215.35■□□□□ 0.052e-6■□□□□ 10
PABPN1Q86U42 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC26.63■■□□□ 1.853e-9■□□□□ 10
PABPN1Q86U42 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.543e-9■□□□□ 10
PABPN1Q86U42 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)20.79■□□□□ 0.923e-9■□□□□ 10
PABPN1Q86U42 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.023e-9■□□□□ 10
PABPN1Q86U42 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)14.13□□□□□ -0.153e-9■□□□□ 10
PABPN1Q86U42 TRMT1-208ENST00000587487 813 ntTSL 325.79■■□□□ 1.721e-7■□□□□ 9.9
PABPN1Q86U42 NOP53-202ENST00000594182 303 ntTSL 331.76■■■□□ 2.672e-7■□□□□ 9.9
PABPN1Q86U42 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.31e-6■□□□□ 9.9
PABPN1Q86U42 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.791e-6■□□□□ 9.9
PABPN1Q86U42 TGFBI-212ENST00000514242 574 ntTSL 224.42■■□□□ 1.54e-7■□□□□ 9.9
PABPN1Q86U42 LLGL2-212ENST00000578719 680 ntTSL 331.79■■■□□ 2.683e-8■□□□□ 9.9
PABPN1Q86U42 FDPS-214ENST00000489324 475 ntTSL 218.62■□□□□ 0.572e-8■□□□□ 9.9
PABPN1Q86U42 EEF1D-241ENST00000531931 614 ntTSL 345.9■■■■■ 4.941e-18■□□□□ 9.9
PABPN1Q86U42 EEF1D-244ENST00000532543 791 ntTSL 334.42■■■■□ 3.11e-18■□□□□ 9.9
PABPN1Q86U42 EEF1D-210ENST00000525223 610 ntTSL 325.73■■□□□ 1.711e-18■□□□□ 9.9
PABPN1Q86U42 ATXN2L-222ENST00000567024 525 ntTSL 334.65■■■■□ 3.141e-14■□□□□ 9.9
PABPN1Q86U42 AC215219.1-201ENST00000400706 1817 ntBASIC25.9■■□□□ 1.742e-6■□□□□ 9.9
PABPN1Q86U42 ACIN1-210ENST00000554680 888 ntTSL 219.38■□□□□ 0.692e-11■□□□□ 9.9
PABPN1Q86U42 SLC6A8-210ENST00000485324 2401 ntTSL 232.39■■■□□ 2.787e-11■□□□□ 9.9
PABPN1Q86U42 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC29.96■■■□□ 2.397e-11■□□□□ 9.9
PABPN1Q86U42 ITIH3-208ENST00000475931 558 ntTSL 330.89■■■□□ 2.549e-11■□□□□ 9.9
PABPN1Q86U42 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■□□□□ 9.9
PABPN1Q86U42 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.442e-6■□□□□ 9.9
PABPN1Q86U42 GPBP1L1-206ENST00000479235 3121 ntTSL 210.76□□□□□ -0.692e-6■□□□□ 9.9
PABPN1Q86U42 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.829e-7■□□□□ 9.9
PABPN1Q86U42 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.085e-7■□□□□ 9.9
Retrieved 100 of 8,254 protein–RNA pairs in 56.6 ms