Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.02■□□□□ 0.47
SHFQ7M4L6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SHFQ7M4L6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHFQ7M4L6 TMEM179-206ENST00000616017 1645 ntBASIC18.01■□□□□ 0.47
SHFQ7M4L6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 AC007322.3-201ENST00000426526 701 ntBASIC18.01■□□□□ 0.47
SHFQ7M4L6 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.01■□□□□ 0.47
SHFQ7M4L6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.01■□□□□ 0.47
SHFQ7M4L6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.01■□□□□ 0.47
SHFQ7M4L6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.01■□□□□ 0.47
SHFQ7M4L6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.01■□□□□ 0.47
SHFQ7M4L6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHFQ7M4L6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18■□□□□ 0.47
SHFQ7M4L6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
SHFQ7M4L6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18■□□□□ 0.47
SHFQ7M4L6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SHFQ7M4L6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 AC091799.1-201ENST00000422823 811 ntBASIC18■□□□□ 0.47
SHFQ7M4L6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SHFQ7M4L6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SHFQ7M4L6 AIRN-201ENST00000601203 4374 ntBASIC18■□□□□ 0.47
SHFQ7M4L6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18■□□□□ 0.47
SHFQ7M4L6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHFQ7M4L6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 TREX1-205ENST00000625293 1783 ntBASIC17.99■□□□□ 0.47
SHFQ7M4L6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.99■□□□□ 0.47
SHFQ7M4L6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHFQ7M4L6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 RBM17P2-201ENST00000616397 1405 ntBASIC17.98■□□□□ 0.47
SHFQ7M4L6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 KRT19P1-201ENST00000405746 1186 ntBASIC17.98■□□□□ 0.47
SHFQ7M4L6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 FAM21FP-204ENST00000608637 956 ntBASIC17.98■□□□□ 0.47
SHFQ7M4L6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SHFQ7M4L6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHFQ7M4L6 AC004854.2-201ENST00000608450 1441 ntBASIC17.98■□□□□ 0.47
SHFQ7M4L6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms