Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 AL049796.1-201ENST00000565336 1766 ntBASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP1BQ7LBR1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP1BQ7LBR1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP1BQ7LBR1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 FAM201B-201ENST00000458407 597 ntBASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 AC105020.6-201ENST00000621523 1217 ntBASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHMP1BQ7LBR1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 AC087633.2-202ENST00000565166 1439 ntBASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms