Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 REXO1L12P-201ENST00000622156 912 ntBASIC25.32■■□□□ 1.64
COPS6Q7L5N1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COPS6Q7L5N1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.31■■□□□ 1.64
COPS6Q7L5N1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
COPS6Q7L5N1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.31■■□□□ 1.64
COPS6Q7L5N1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
COPS6Q7L5N1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
COPS6Q7L5N1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.3■■□□□ 1.64
COPS6Q7L5N1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 BX088651.1-201ENST00000540551 451 ntBASIC25.29■■□□□ 1.64
COPS6Q7L5N1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MIR4785-201ENST00000585005 73 ntBASIC25.29■■□□□ 1.64
COPS6Q7L5N1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COPS6Q7L5N1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 SMG8-203ENST00000578922 2178 ntBASIC25.28■■□□□ 1.64
COPS6Q7L5N1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
COPS6Q7L5N1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 AC211429.1-201ENST00000415277 523 ntBASIC25.27■■□□□ 1.64
COPS6Q7L5N1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 ECEL1P3-201ENST00000427961 737 ntBASIC25.27■■□□□ 1.64
COPS6Q7L5N1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 AL355075.4-201ENST00000554988 638 ntBASIC25.27■■□□□ 1.64
COPS6Q7L5N1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COPS6Q7L5N1 AC004264.1-201ENST00000608354 794 ntBASIC25.27■■□□□ 1.64
COPS6Q7L5N1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms