Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01554Q52M75 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01554Q52M75 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC01554Q52M75 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01554Q52M75 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LINC01554Q52M75 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01554Q52M75 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC10.02□□□□□ -0.8
LINC01554Q52M75 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01554Q52M75 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC01554Q52M75 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01554Q52M75 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
LINC01554Q52M75 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 ESRRAP2-201ENST00000418437 1549 ntBASIC10.02□□□□□ -0.81
LINC01554Q52M75 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01554Q52M75 AC103702.1-201ENST00000548801 2630 ntBASIC10.02□□□□□ -0.81
LINC01554Q52M75 AL136379.1-201ENST00000623471 2642 ntBASIC10.02□□□□□ -0.81
LINC01554Q52M75 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01554Q52M75 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 AC022616.5-201ENST00000518796 181 ntBASIC10.01□□□□□ -0.81
LINC01554Q52M75 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC01554Q52M75 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01554Q52M75 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LINC01554Q52M75 AL512408.1-201ENST00000569378 2000 ntBASIC10□□□□□ -0.81
LINC01554Q52M75 AC092850.2-201ENST00000623821 2697 ntBASIC10□□□□□ -0.81
LINC01554Q52M75 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10□□□□□ -0.81
LINC01554Q52M75 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LINC01554Q52M75 AC092053.2-201ENST00000640557 1818 ntBASIC10□□□□□ -0.81
LINC01554Q52M75 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms