Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 CCH1YGR217W 6120 nt1.29□□□□□ -2.2
NUP53Q03790 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
NUP53Q03790 EST2YLR318W 2655 nt1.29□□□□□ -2.2
NUP53Q03790 COX5BYIL111W 456 nt1.29□□□□□ -2.2
NUP53Q03790 STO1YMR125W 2586 nt1.29□□□□□ -2.2
NUP53Q03790 AZF1YOR113W 2745 nt1.29□□□□□ -2.2
NUP53Q03790 MMS4YBR098W 2076 nt1.28□□□□□ -2.2
NUP53Q03790 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
NUP53Q03790 YDL247W-AYDL247W-A 75 nt1.28□□□□□ -2.2
NUP53Q03790 COG6YNL041C 2520 nt1.28□□□□□ -2.2
NUP53Q03790 SET3YKR029C 2256 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
NUP53Q03790 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
NUP53Q03790 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
NUP53Q03790 PET127YOR017W 2403 nt1.27□□□□□ -2.21
NUP53Q03790 SMC1YFL008W 3678 nt1.26□□□□□ -2.21
NUP53Q03790 HUG1YML058W-A 207 nt1.26□□□□□ -2.21
NUP53Q03790 ASE1YOR058C 2658 nt1.26□□□□□ -2.21
NUP53Q03790 PAN2YGL094C 3348 nt1.26□□□□□ -2.21
NUP53Q03790 FYV8YGR196C 2454 nt1.26□□□□□ -2.21
NUP53Q03790 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
NUP53Q03790 FYV10YIL097W 1551 nt1.25□□□□□ -2.21
NUP53Q03790 NUP188YML103C 4968 nt1.25□□□□□ -2.21
NUP53Q03790 STF2YGR008C 255 nt1.25□□□□□ -2.21
NUP53Q03790 CDC25YLR310C 4770 nt1.25□□□□□ -2.21
NUP53Q03790 NOP9YJL010C 2001 nt1.24□□□□□ -2.21
NUP53Q03790 YML002WYML002W 2214 nt1.24□□□□□ -2.21
NUP53Q03790 YDR210WYDR210W 228 nt1.23□□□□□ -2.21
NUP53Q03790 HKR1YDR420W 5409 nt1.22□□□□□ -2.21
NUP53Q03790 SBH1YER087C-B 249 nt1.22□□□□□ -2.21
NUP53Q03790 YKL100W-AYKL100W-A 90 nt1.22□□□□□ -2.21
NUP53Q03790 snR190snR190 190 nt1.22□□□□□ -2.21
NUP53Q03790 BUD3YCL014W 4911 nt1.22□□□□□ -2.21
NUP53Q03790 WAR1YML076C 2835 nt1.21□□□□□ -2.22
NUP53Q03790 tM(CAU)Q2tM(CAU)Q2 78 nt1.21□□□□□ -2.22
NUP53Q03790 YLR041WYLR041W 321 nt1.21□□□□□ -2.22
NUP53Q03790 APL3YBL037W 3078 nt1.19□□□□□ -2.22
NUP53Q03790 tQ(UUG)E2tQ(UUG)E2 72 nt1.19□□□□□ -2.22
NUP53Q03790 YLR232WYLR232W 348 nt1.19□□□□□ -2.22
NUP53Q03790 SWI4YER111C 3282 nt1.18□□□□□ -2.22
NUP53Q03790 CDC39YCR093W 6327 nt1.18□□□□□ -2.22
NUP53Q03790 tS(GCU)Q1tS(GCU)Q1 86 nt1.18□□□□□ -2.22
NUP53Q03790 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
NUP53Q03790 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
NUP53Q03790 KAP120YPL125W 3099 nt1.18□□□□□ -2.22
NUP53Q03790 MSN5YDR335W 3675 nt1.17□□□□□ -2.22
NUP53Q03790 SEC1YDR164C 2175 nt1.16□□□□□ -2.22
NUP53Q03790 snR81snR81 201 nt1.16□□□□□ -2.22
NUP53Q03790 YIL142C-AYIL142C-A 333 nt1.16□□□□□ -2.22
NUP53Q03790 YJL127W-AYJL127W-A 117 nt1.16□□□□□ -2.22
NUP53Q03790 RAD9YDR217C 3930 nt1.14□□□□□ -2.23
NUP53Q03790 RPL26BYGR034W 384 nt1.14□□□□□ -2.23
NUP53Q03790 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
NUP53Q03790 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
NUP53Q03790 tN(GUU)QtN(GUU)Q 71 nt1.13□□□□□ -2.23
NUP53Q03790 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
NUP53Q03790 IML1YJR138W 4755 nt1.12□□□□□ -2.23
NUP53Q03790 YBR200W-AYBR200W-A 165 nt1.12□□□□□ -2.23
NUP53Q03790 NUP145YGL092W 3954 nt1.12□□□□□ -2.23
NUP53Q03790 YCS4YLR272C 3531 nt1.11□□□□□ -2.23
NUP53Q03790 YNL266WYNL266W 420 nt1.11□□□□□ -2.23
NUP53Q03790 snR45snR45 172 nt1.11□□□□□ -2.23
NUP53Q03790 SEC3YER008C 4011 nt1.1□□□□□ -2.23
NUP53Q03790 YLL066W-BYLL066W-B 171 nt1.1□□□□□ -2.23
NUP53Q03790 YBR072C-AYBR072C-A 162 nt1.1□□□□□ -2.23
NUP53Q03790 LAA1YJL207C 6045 nt1.09□□□□□ -2.23
NUP53Q03790 SIP4YJL089W 2490 nt1.08□□□□□ -2.24
NUP53Q03790 YGR146C-AYGR146C-A 162 nt1.07□□□□□ -2.24
NUP53Q03790 YOL083C-AYOL083C-A 141 nt1.06□□□□□ -2.24
NUP53Q03790 NST1YNL091W 3723 nt1.06□□□□□ -2.24
NUP53Q03790 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
NUP53Q03790 CLU1YMR012W 3834 nt1.05□□□□□ -2.24
NUP53Q03790 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
NUP53Q03790 YAL037C-AYAL037C-A 93 nt1.04□□□□□ -2.24
NUP53Q03790 NNF2YGR089W 2811 nt1.04□□□□□ -2.24
NUP53Q03790 UBP3YER151C 2739 nt1.03□□□□□ -2.24
NUP53Q03790 YBL071C-BYBL071C-B 99 nt1.03□□□□□ -2.24
NUP53Q03790 YPR160W-AYPR160W-A 81 nt1.02□□□□□ -2.25
NUP53Q03790 SEC8YPR055W 3198 nt1.01□□□□□ -2.25
NUP53Q03790 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
NUP53Q03790 RKR1YMR247C 4689 nt0.99□□□□□ -2.25
NUP53Q03790 BEM3YPL115C 3387 nt0.99□□□□□ -2.25
NUP53Q03790 ROM2YLR371W 4071 nt0.98□□□□□ -2.25
NUP53Q03790 RPS26AYGL189C 360 nt0.97□□□□□ -2.25
NUP53Q03790 YLR399W-AYLR399W-A 105 nt0.97□□□□□ -2.25
NUP53Q03790 YBR196C-AYBR196C-A 150 nt0.97□□□□□ -2.25
NUP53Q03790 snR62snR62 100 nt0.96□□□□□ -2.26
NUP53Q03790 SEC10YLR166C 2616 nt0.95□□□□□ -2.26
NUP53Q03790 VAM6YDL077C 3150 nt0.93□□□□□ -2.26
NUP53Q03790 PAU12YGR294W 363 nt0.92□□□□□ -2.26
NUP53Q03790 YLR286W-AYLR286W-A 135 nt0.92□□□□□ -2.26
NUP53Q03790 PAU24YBR301W 363 nt0.92□□□□□ -2.26
NUP53Q03790 YNL054W-BYNL054W-B 5250 nt0.92□□□□□ -2.26
NUP53Q03790 YOL164W-AYOL164W-A 183 nt0.91□□□□□ -2.26
NUP53Q03790 EST1YLR233C 2100 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms