Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
RPL38P63173 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.22■□□□□ 0.67
RPL38P63173 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.22■□□□□ 0.67
RPL38P63173 KRT18P5-201ENST00000436075 1291 ntBASIC19.22■□□□□ 0.67
RPL38P63173 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL38P63173 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL38P63173 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL38P63173 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPL38P63173 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL38P63173 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL38P63173 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPL38P63173 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL38P63173 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
RPL38P63173 AC016769.1-201ENST00000409132 1010 ntBASIC19.21■□□□□ 0.67
RPL38P63173 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.21■□□□□ 0.67
RPL38P63173 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.21■□□□□ 0.67
RPL38P63173 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.21■□□□□ 0.67
RPL38P63173 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL38P63173 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPL38P63173 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL38P63173 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL38P63173 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL38P63173 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.2■□□□□ 0.66
RPL38P63173 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RPL38P63173 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.2■□□□□ 0.66
RPL38P63173 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 RARRES2P4-201ENST00000514074 484 ntBASIC19.2■□□□□ 0.66
RPL38P63173 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL38P63173 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RPL38P63173 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RPL38P63173 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL38P63173 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL38P63173 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
RPL38P63173 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.19■□□□□ 0.66
RPL38P63173 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RPL38P63173 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.19■□□□□ 0.66
RPL38P63173 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL38P63173 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RPL38P63173 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RPL38P63173 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
RPL38P63173 PTBP1P-201ENST00000554374 1601 ntBASIC19.18■□□□□ 0.66
RPL38P63173 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPL38P63173 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
RPL38P63173 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.18■□□□□ 0.66
RPL38P63173 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.18■□□□□ 0.66
RPL38P63173 MCRIP2P1-201ENST00000394346 511 ntBASIC19.18■□□□□ 0.66
RPL38P63173 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL38P63173 CNN2P6-201ENST00000439038 900 ntBASIC19.18■□□□□ 0.66
RPL38P63173 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms