Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
RPS3AP61247 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RPS3AP61247 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RPS3AP61247 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.65■□□□□ 0.58
RPS3AP61247 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPS3AP61247 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.65■□□□□ 0.58
RPS3AP61247 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS3AP61247 CYP2T1P-201ENST00000432607 1285 ntBASIC18.65■□□□□ 0.58
RPS3AP61247 NCF1B-203ENST00000435988 1254 ntBASIC18.65■□□□□ 0.58
RPS3AP61247 AF201337.1-201ENST00000520239 748 ntBASIC18.65■□□□□ 0.58
RPS3AP61247 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.65■□□□□ 0.58
RPS3AP61247 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.65■□□□□ 0.58
RPS3AP61247 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS3AP61247 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.65■□□□□ 0.58
RPS3AP61247 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RPS3AP61247 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS3AP61247 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS3AP61247 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPS3AP61247 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
RPS3AP61247 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS3AP61247 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS3AP61247 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS3AP61247 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.64■□□□□ 0.57
RPS3AP61247 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS3AP61247 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS3AP61247 AC133552.2-202ENST00000575694 574 ntBASIC18.64■□□□□ 0.57
RPS3AP61247 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 OR10C1-204ENST00000622521 1039 ntBASIC18.64■□□□□ 0.57
RPS3AP61247 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.57
RPS3AP61247 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS3AP61247 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS3AP61247 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RPS3AP61247 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RPS3AP61247 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RPS3AP61247 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 SLC29A4P1-201ENST00000398760 971 ntBASIC18.63■□□□□ 0.57
RPS3AP61247 HLA-L-209ENST00000420110 1011 ntBASIC18.63■□□□□ 0.57
RPS3AP61247 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 AC083906.2-201ENST00000511578 360 ntBASIC18.63■□□□□ 0.57
RPS3AP61247 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.63■□□□□ 0.57
RPS3AP61247 AL109923.1-201ENST00000618799 583 ntBASIC18.63■□□□□ 0.57
RPS3AP61247 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS3AP61247 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS3AP61247 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RPS3AP61247 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS3AP61247 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS3AP61247 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms