Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.61■□□□□ 0.89
EIF3EP60228 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.61■□□□□ 0.89
EIF3EP60228 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.61■□□□□ 0.89
EIF3EP60228 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.61■□□□□ 0.89
EIF3EP60228 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.61■□□□□ 0.89
EIF3EP60228 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.61■□□□□ 0.89
EIF3EP60228 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
EIF3EP60228 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
EIF3EP60228 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.61■□□□□ 0.89
EIF3EP60228 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EIF3EP60228 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EIF3EP60228 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
EIF3EP60228 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EIF3EP60228 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.6■□□□□ 0.89
EIF3EP60228 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.6■□□□□ 0.89
EIF3EP60228 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
EIF3EP60228 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.6■□□□□ 0.89
EIF3EP60228 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
EIF3EP60228 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.6■□□□□ 0.89
EIF3EP60228 OR10C1-204ENST00000622521 1039 ntBASIC20.6■□□□□ 0.89
EIF3EP60228 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EIF3EP60228 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
EIF3EP60228 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.59■□□□□ 0.89
EIF3EP60228 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.59■□□□□ 0.89
EIF3EP60228 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.59■□□□□ 0.89
EIF3EP60228 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.59■□□□□ 0.89
EIF3EP60228 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EIF3EP60228 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 AC010980.2-201ENST00000587099 1412 ntBASIC20.59■□□□□ 0.89
EIF3EP60228 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.59■□□□□ 0.89
EIF3EP60228 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
EIF3EP60228 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3EP60228 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.58■□□□□ 0.89
EIF3EP60228 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EIF3EP60228 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EIF3EP60228 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.58■□□□□ 0.89
EIF3EP60228 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EIF3EP60228 AC004911.1-201ENST00000416316 871 ntBASIC20.58■□□□□ 0.89
EIF3EP60228 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3EP60228 AL031963.3-201ENST00000606441 850 ntBASIC20.58■□□□□ 0.89
EIF3EP60228 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
EIF3EP60228 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
EIF3EP60228 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
EIF3EP60228 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.58■□□□□ 0.88
EIF3EP60228 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3EP60228 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3EP60228 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3EP60228 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3EP60228 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3EP60228 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3EP60228 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3EP60228 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms