Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 YLR232WYLR232W 348 nt1.43□□□□□ -2.18
SMX3P54999 RPL26BYGR034W 384 nt1.41□□□□□ -2.18
SMX3P54999 APL3YBL037W 3078 nt1.41□□□□□ -2.18
SMX3P54999 RCO1YMR075W 2055 nt1.41□□□□□ -2.18
SMX3P54999 TRM732YMR259C 4263 nt1.4□□□□□ -2.19
SMX3P54999 NUP188YML103C 4968 nt1.4□□□□□ -2.19
SMX3P54999 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
SMX3P54999 ASE1YOR058C 2658 nt1.39□□□□□ -2.19
SMX3P54999 CHS1YNL192W 3396 nt1.38□□□□□ -2.19
SMX3P54999 YDR210WYDR210W 228 nt1.38□□□□□ -2.19
SMX3P54999 YJL127W-AYJL127W-A 117 nt1.38□□□□□ -2.19
SMX3P54999 YBR200W-AYBR200W-A 165 nt1.38□□□□□ -2.19
SMX3P54999 SWI4YER111C 3282 nt1.38□□□□□ -2.19
SMX3P54999 SSK2YNR031C 4740 nt1.37□□□□□ -2.19
SMX3P54999 BST1YFL025C 3090 nt1.37□□□□□ -2.19
SMX3P54999 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
SMX3P54999 COG6YNL041C 2520 nt1.36□□□□□ -2.19
SMX3P54999 YLR422WYLR422W 5799 nt1.36□□□□□ -2.19
SMX3P54999 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
SMX3P54999 DNF3YMR162C 4971 nt1.35□□□□□ -2.19
SMX3P54999 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
SMX3P54999 AZF1YOR113W 2745 nt1.34□□□□□ -2.19
SMX3P54999 CAT8YMR280C 4302 nt1.33□□□□□ -2.2
SMX3P54999 LAA1YJL207C 6045 nt1.32□□□□□ -2.2
SMX3P54999 CDC39YCR093W 6327 nt1.32□□□□□ -2.2
SMX3P54999 PET127YOR017W 2403 nt1.32□□□□□ -2.2
SMX3P54999 SAC3YDR159W 3906 nt1.32□□□□□ -2.2
SMX3P54999 NUP145YGL092W 3954 nt1.32□□□□□ -2.2
SMX3P54999 YCS4YLR272C 3531 nt1.32□□□□□ -2.2
SMX3P54999 PRP16YKR086W 3216 nt1.31□□□□□ -2.2
SMX3P54999 FYV8YGR196C 2454 nt1.31□□□□□ -2.2
SMX3P54999 BIR1YJR089W 2865 nt1.3□□□□□ -2.2
SMX3P54999 EST2YLR318W 2655 nt1.29□□□□□ -2.2
SMX3P54999 SXM1YDR395W 2835 nt1.29□□□□□ -2.2
SMX3P54999 YGR146C-AYGR146C-A 162 nt1.29□□□□□ -2.2
SMX3P54999 tQ(UUG)E2tQ(UUG)E2 72 nt1.29□□□□□ -2.2
SMX3P54999 SEC1YDR164C 2175 nt1.29□□□□□ -2.2
SMX3P54999 SEC3YER008C 4011 nt1.29□□□□□ -2.2
SMX3P54999 tN(GUU)QtN(GUU)Q 71 nt1.28□□□□□ -2.2
SMX3P54999 YNL266WYNL266W 420 nt1.28□□□□□ -2.2
SMX3P54999 BEM3YPL115C 3387 nt1.27□□□□□ -2.21
SMX3P54999 SEC8YPR055W 3198 nt1.27□□□□□ -2.21
SMX3P54999 snR81snR81 201 nt1.27□□□□□ -2.21
SMX3P54999 YIL142C-AYIL142C-A 333 nt1.27□□□□□ -2.21
SMX3P54999 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
SMX3P54999 tS(GCU)Q1tS(GCU)Q1 86 nt1.26□□□□□ -2.21
SMX3P54999 YBR072C-AYBR072C-A 162 nt1.26□□□□□ -2.21
SMX3P54999 SPC110YDR356W 2835 nt1.26□□□□□ -2.21
SMX3P54999 YOR093CYOR093C 4947 nt1.25□□□□□ -2.21
SMX3P54999 YLR399W-AYLR399W-A 105 nt1.22□□□□□ -2.21
SMX3P54999 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
SMX3P54999 HKR1YDR420W 5409 nt1.21□□□□□ -2.22
SMX3P54999 UBP3YER151C 2739 nt1.21□□□□□ -2.22
SMX3P54999 MSH3YCR092C 3057 nt1.21□□□□□ -2.22
SMX3P54999 YAL037C-AYAL037C-A 93 nt1.2□□□□□ -2.22
SMX3P54999 YLL066W-BYLL066W-B 171 nt1.2□□□□□ -2.22
SMX3P54999 snR45snR45 172 nt1.18□□□□□ -2.22
SMX3P54999 NUP192YJL039C 5052 nt1.18□□□□□ -2.22
SMX3P54999 YOL083C-AYOL083C-A 141 nt1.17□□□□□ -2.22
SMX3P54999 ROM2YLR371W 4071 nt1.15□□□□□ -2.23
SMX3P54999 NNF2YGR089W 2811 nt1.15□□□□□ -2.23
SMX3P54999 CDC25YLR310C 4770 nt1.15□□□□□ -2.23
SMX3P54999 YSP1YHR155W 3687 nt1.14□□□□□ -2.23
SMX3P54999 YBR196C-AYBR196C-A 150 nt1.14□□□□□ -2.23
SMX3P54999 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
SMX3P54999 MSN5YDR335W 3675 nt1.13□□□□□ -2.23
SMX3P54999 GLG1YKR058W 1851 nt1.12□□□□□ -2.23
SMX3P54999 SEC10YLR166C 2616 nt1.12□□□□□ -2.23
SMX3P54999 YBL071C-BYBL071C-B 99 nt1.11□□□□□ -2.23
SMX3P54999 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
SMX3P54999 FIG2YCR089W 4830 nt1.1□□□□□ -2.23
SMX3P54999 REV3YPL167C 4515 nt1.1□□□□□ -2.23
SMX3P54999 YNL284C-BYNL284C-B 5268 nt1.09□□□□□ -2.24
SMX3P54999 snR62snR62 100 nt1.08□□□□□ -2.24
SMX3P54999 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
SMX3P54999 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
SMX3P54999 RPM2YML091C 3609 nt1.06□□□□□ -2.24
SMX3P54999 RPS26AYGL189C 360 nt1.06□□□□□ -2.24
SMX3P54999 YGR130CYGR130C 2451 nt1.06□□□□□ -2.24
SMX3P54999 MYO1YHR023W 5787 nt1.06□□□□□ -2.24
SMX3P54999 ANS1YHR126C 480 nt1.05□□□□□ -2.24
SMX3P54999 RKR1YMR247C 4689 nt1.04□□□□□ -2.24
SMX3P54999 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
SMX3P54999 YLL006W-AYLL006W-A 177 nt1.04□□□□□ -2.24
SMX3P54999 CSE1YGL238W 2883 nt1.03□□□□□ -2.24
SMX3P54999 YLR286W-AYLR286W-A 135 nt1.03□□□□□ -2.24
SMX3P54999 YOL164W-AYOL164W-A 183 nt1.02□□□□□ -2.25
SMX3P54999 EST1YLR233C 2100 nt1.01□□□□□ -2.25
SMX3P54999 tD(GUC)QtD(GUC)Q 75 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)E1tH(GUG)E1 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)E2tH(GUG)E2 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)G1tH(GUG)G1 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)G2tH(GUG)G2 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)HtH(GUG)H 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)KtH(GUG)K 72 nt1.01□□□□□ -2.25
SMX3P54999 tH(GUG)MtH(GUG)M 72 nt1.01□□□□□ -2.25
SMX3P54999 HUG1YML058W-A 207 nt1.01□□□□□ -2.25
SMX3P54999 BEM2YER155C 6504 nt0.99□□□□□ -2.25
SMX3P54999 YBL100W-CYBL100W-C 120 nt0.99□□□□□ -2.25
SMX3P54999 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms