Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SMG8-203ENST00000578922 2178 ntBASIC21.19■□□□□ 0.98
CACNA2D1P54289 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 KRT17P3-201ENST00000420566 1262 ntBASIC21.18■□□□□ 0.98
CACNA2D1P54289 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CACNA2D1P54289 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.18■□□□□ 0.98
CACNA2D1P54289 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 AC066615.1-201ENST00000640911 628 ntBASIC21.17■□□□□ 0.98
CACNA2D1P54289 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CACNA2D1P54289 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNA2D1P54289 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.16■□□□□ 0.98
CACNA2D1P54289 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CACNA2D1P54289 AL158047.1-201ENST00000445918 881 ntBASIC21.16■□□□□ 0.98
CACNA2D1P54289 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.16■□□□□ 0.98
CACNA2D1P54289 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.16■□□□□ 0.98
CACNA2D1P54289 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CACNA2D1P54289 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.16■□□□□ 0.98
CACNA2D1P54289 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.15■□□□□ 0.98
CACNA2D1P54289 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 AC142381.4-202ENST00000563973 229 ntBASIC21.15■□□□□ 0.98
CACNA2D1P54289 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 RN7SL471P-201ENST00000580476 299 ntBASIC21.15■□□□□ 0.98
CACNA2D1P54289 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CACNA2D1P54289 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNA2D1P54289 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CACNA2D1P54289 AL391422.3-201ENST00000603791 2761 ntBASIC21.14■□□□□ 0.98
CACNA2D1P54289 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CACNA2D1P54289 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CACNA2D1P54289 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.14■□□□□ 0.98
CACNA2D1P54289 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CACNA2D1P54289 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNA2D1P54289 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNA2D1P54289 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CACNA2D1P54289 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.14■□□□□ 0.97
CACNA2D1P54289 MTDHP1-201ENST00000605323 784 ntBASIC21.14■□□□□ 0.97
CACNA2D1P54289 AL031963.3-201ENST00000606441 850 ntBASIC21.14■□□□□ 0.97
CACNA2D1P54289 AL359736.2-201ENST00000621992 437 ntBASIC21.14■□□□□ 0.97
CACNA2D1P54289 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.14■□□□□ 0.97
CACNA2D1P54289 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNA2D1P54289 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNA2D1P54289 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms