Protein–RNA interactions for Protein: P40969

CEP3, Centromere DNA-binding protein complex CBF3 subunit B, yeastyeast

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEP3P40969 YBR200W-AYBR200W-A 165 nt1.56□□□□□ -2.16
CEP3P40969 TAH1YCR060W 336 nt1.55□□□□□ -2.16
CEP3P40969 CAT8YMR280C 4302 nt1.54□□□□□ -2.16
CEP3P40969 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
CEP3P40969 snR190snR190 190 nt1.54□□□□□ -2.16
CEP3P40969 EST2YLR318W 2655 nt1.53□□□□□ -2.16
CEP3P40969 YIL071W-AYIL071W-A 477 nt1.53□□□□□ -2.16
CEP3P40969 NUP157YER105C 4176 nt1.53□□□□□ -2.16
CEP3P40969 FYV10YIL097W 1551 nt1.52□□□□□ -2.17
CEP3P40969 SPC110YDR356W 2835 nt1.52□□□□□ -2.17
CEP3P40969 STF2YGR008C 255 nt1.52□□□□□ -2.17
CEP3P40969 HUG1YML058W-A 207 nt1.52□□□□□ -2.17
CEP3P40969 YBR099CYBR099C 384 nt1.52□□□□□ -2.17
CEP3P40969 AZF1YOR113W 2745 nt1.52□□□□□ -2.17
CEP3P40969 YBR178WYBR178W 375 nt1.51□□□□□ -2.17
CEP3P40969 MSH3YCR092C 3057 nt1.5□□□□□ -2.17
CEP3P40969 YNL067W-BYNL067W-B 141 nt1.5□□□□□ -2.17
CEP3P40969 KAP120YPL125W 3099 nt1.49□□□□□ -2.17
CEP3P40969 SEC21YNL287W 2808 nt1.49□□□□□ -2.17
CEP3P40969 YDR524C-AYDR524C-A 120 nt1.48□□□□□ -2.17
CEP3P40969 SOM1YEL059C-A 225 nt1.48□□□□□ -2.17
CEP3P40969 QCR9YGR183C 201 nt1.48□□□□□ -2.17
CEP3P40969 YLR232WYLR232W 348 nt1.48□□□□□ -2.17
CEP3P40969 NUP188YML103C 4968 nt1.48□□□□□ -2.17
CEP3P40969 YNL284C-BYNL284C-B 5268 nt1.47□□□□□ -2.17
CEP3P40969 PRP16YKR086W 3216 nt1.47□□□□□ -2.17
CEP3P40969 snR39BsnR39B 96 nt1.47□□□□□ -2.17
CEP3P40969 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
CEP3P40969 YDR544CYDR544C 429 nt1.46□□□□□ -2.18
CEP3P40969 HKR1YDR420W 5409 nt1.45□□□□□ -2.18
CEP3P40969 PIK1YNL267W 3201 nt1.45□□□□□ -2.18
CEP3P40969 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
CEP3P40969 CDC39YCR093W 6327 nt1.44□□□□□ -2.18
CEP3P40969 YBL109WYBL109W 336 nt1.43□□□□□ -2.18
CEP3P40969 GEA2YEL022W 4380 nt1.43□□□□□ -2.18
CEP3P40969 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
CEP3P40969 tM(CAU)Q2tM(CAU)Q2 78 nt1.42□□□□□ -2.18
CEP3P40969 PMP2YEL017C-A 132 nt1.41□□□□□ -2.18
CEP3P40969 YHR131W-AYHR131W-A 246 nt1.41□□□□□ -2.18
CEP3P40969 YLR399W-AYLR399W-A 105 nt1.41□□□□□ -2.18
CEP3P40969 YGR130CYGR130C 2451 nt1.4□□□□□ -2.19
CEP3P40969 TFB5YDR079C-A 219 nt1.39□□□□□ -2.19
CEP3P40969 YPR160W-AYPR160W-A 81 nt1.39□□□□□ -2.19
CEP3P40969 snR61snR61 90 nt1.38□□□□□ -2.19
CEP3P40969 YMR326CYMR326C 309 nt1.38□□□□□ -2.19
CEP3P40969 YNL103W-AYNL103W-A 90 nt1.38□□□□□ -2.19
CEP3P40969 COG6YNL041C 2520 nt1.37□□□□□ -2.19
CEP3P40969 YDL073WYDL073W 2955 nt1.37□□□□□ -2.19
CEP3P40969 YDR210WYDR210W 228 nt1.36□□□□□ -2.19
CEP3P40969 YGR146C-AYGR146C-A 162 nt1.34□□□□□ -2.19
CEP3P40969 YSP1YHR155W 3687 nt1.34□□□□□ -2.2
CEP3P40969 YHR217CYHR217C 462 nt1.32□□□□□ -2.2
CEP3P40969 IML1YJR138W 4755 nt1.31□□□□□ -2.2
CEP3P40969 SBH1YER087C-B 249 nt1.31□□□□□ -2.2
CEP3P40969 tN(GUU)QtN(GUU)Q 71 nt1.31□□□□□ -2.2
CEP3P40969 YJL127W-AYJL127W-A 117 nt1.3□□□□□ -2.2
CEP3P40969 SEC1YDR164C 2175 nt1.3□□□□□ -2.2
CEP3P40969 BEM3YPL115C 3387 nt1.28□□□□□ -2.2
CEP3P40969 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
CEP3P40969 ULP2YIL031W 3105 nt1.26□□□□□ -2.21
CEP3P40969 BIR1YJR089W 2865 nt1.26□□□□□ -2.21
CEP3P40969 RCO1YMR075W 2055 nt1.24□□□□□ -2.21
CEP3P40969 PAU12YGR294W 363 nt1.24□□□□□ -2.21
CEP3P40969 PAU24YBR301W 363 nt1.24□□□□□ -2.21
CEP3P40969 tH(GUG)E1tH(GUG)E1 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)E2tH(GUG)E2 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)G1tH(GUG)G1 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)G2tH(GUG)G2 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)HtH(GUG)H 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)KtH(GUG)K 72 nt1.23□□□□□ -2.21
CEP3P40969 tH(GUG)MtH(GUG)M 72 nt1.23□□□□□ -2.21
CEP3P40969 UBP3YER151C 2739 nt1.23□□□□□ -2.21
CEP3P40969 GLG1YKR058W 1851 nt1.22□□□□□ -2.21
CEP3P40969 DOP1YDR141C 5097 nt1.22□□□□□ -2.21
CEP3P40969 BEM2YER155C 6504 nt1.21□□□□□ -2.22
CEP3P40969 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
CEP3P40969 tV(UAC)BtV(UAC)B 74 nt1.2□□□□□ -2.22
CEP3P40969 tV(UAC)DtV(UAC)D 74 nt1.2□□□□□ -2.22
CEP3P40969 YNL266WYNL266W 420 nt1.2□□□□□ -2.22
CEP3P40969 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
CEP3P40969 BUD3YCL014W 4911 nt1.19□□□□□ -2.22
CEP3P40969 YGL041C-BYGL041C-B 183 nt1.19□□□□□ -2.22
CEP3P40969 YBR072C-AYBR072C-A 162 nt1.18□□□□□ -2.22
CEP3P40969 YPL060C-AYPL060C-A 3315 nt1.17□□□□□ -2.22
CEP3P40969 NST1YNL091W 3723 nt1.17□□□□□ -2.22
CEP3P40969 NNF2YGR089W 2811 nt1.15□□□□□ -2.23
CEP3P40969 YDL247W-AYDL247W-A 75 nt1.12□□□□□ -2.23
CEP3P40969 LTE1YAL024C 4308 nt1.1□□□□□ -2.23
CEP3P40969 SIP4YJL089W 2490 nt1.1□□□□□ -2.23
CEP3P40969 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
CEP3P40969 YAL037C-AYAL037C-A 93 nt1.09□□□□□ -2.23
CEP3P40969 UTP20YBL004W 7482 nt1.08□□□□□ -2.24
CEP3P40969 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
CEP3P40969 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
CEP3P40969 snR81snR81 201 nt1.07□□□□□ -2.24
CEP3P40969 SEC10YLR166C 2616 nt1.06□□□□□ -2.24
CEP3P40969 YLL006W-AYLL006W-A 177 nt1.05□□□□□ -2.24
CEP3P40969 YBR196C-AYBR196C-A 150 nt1.04□□□□□ -2.24
CEP3P40969 tS(GCU)Q1tS(GCU)Q1 86 nt1.02□□□□□ -2.25
CEP3P40969 BUL2YML111W 2763 nt1.02□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 83.9 ms