Protein–RNA interactions for Protein: P40522

VHR1, Transcription factor VHR1, yeastyeast

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHR1P40522 QCR9YGR183C 201 nt1.52□□□□□ -2.17
VHR1P40522 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
VHR1P40522 ROM2YLR371W 4071 nt1.51□□□□□ -2.17
VHR1P40522 NUP145YGL092W 3954 nt1.51□□□□□ -2.17
VHR1P40522 YMR326CYMR326C 309 nt1.51□□□□□ -2.17
VHR1P40522 snR190snR190 190 nt1.51□□□□□ -2.17
VHR1P40522 FYV10YIL097W 1551 nt1.51□□□□□ -2.17
VHR1P40522 YNL103W-AYNL103W-A 90 nt1.5□□□□□ -2.17
VHR1P40522 snR39BsnR39B 96 nt1.5□□□□□ -2.17
VHR1P40522 YBR200W-AYBR200W-A 165 nt1.5□□□□□ -2.17
VHR1P40522 NUP157YER105C 4176 nt1.5□□□□□ -2.17
VHR1P40522 CHS1YNL192W 3396 nt1.5□□□□□ -2.17
VHR1P40522 TRM732YMR259C 4263 nt1.49□□□□□ -2.17
VHR1P40522 SEC3YER008C 4011 nt1.49□□□□□ -2.17
VHR1P40522 SPC110YDR356W 2835 nt1.49□□□□□ -2.17
VHR1P40522 ASE1YOR058C 2658 nt1.48□□□□□ -2.17
VHR1P40522 GEA2YEL022W 4380 nt1.48□□□□□ -2.17
VHR1P40522 snR61snR61 90 nt1.47□□□□□ -2.17
VHR1P40522 tM(CAU)Q2tM(CAU)Q2 78 nt1.47□□□□□ -2.17
VHR1P40522 STF2YGR008C 255 nt1.47□□□□□ -2.17
VHR1P40522 tQ(UUG)E2tQ(UUG)E2 72 nt1.47□□□□□ -2.17
VHR1P40522 YLR232WYLR232W 348 nt1.47□□□□□ -2.17
VHR1P40522 NUP192YJL039C 5052 nt1.47□□□□□ -2.17
VHR1P40522 PMD1YER132C 5262 nt1.47□□□□□ -2.17
VHR1P40522 YHR131W-AYHR131W-A 246 nt1.46□□□□□ -2.18
VHR1P40522 NUP188YML103C 4968 nt1.45□□□□□ -2.18
VHR1P40522 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
VHR1P40522 PET127YOR017W 2403 nt1.44□□□□□ -2.18
VHR1P40522 YHR217CYHR217C 462 nt1.43□□□□□ -2.18
VHR1P40522 RPM2YML091C 3609 nt1.41□□□□□ -2.18
VHR1P40522 SSK2YNR031C 4740 nt1.41□□□□□ -2.18
VHR1P40522 SEC8YPR055W 3198 nt1.4□□□□□ -2.19
VHR1P40522 RAD9YDR217C 3930 nt1.4□□□□□ -2.19
VHR1P40522 CDC39YCR093W 6327 nt1.4□□□□□ -2.19
VHR1P40522 FYV8YGR196C 2454 nt1.4□□□□□ -2.19
VHR1P40522 CAT8YMR280C 4302 nt1.39□□□□□ -2.19
VHR1P40522 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
VHR1P40522 SBH1YER087C-B 249 nt1.38□□□□□ -2.19
VHR1P40522 YDR210WYDR210W 228 nt1.36□□□□□ -2.19
VHR1P40522 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
VHR1P40522 YJL127W-AYJL127W-A 117 nt1.35□□□□□ -2.19
VHR1P40522 COG6YNL041C 2520 nt1.35□□□□□ -2.19
VHR1P40522 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
VHR1P40522 PRP16YKR086W 3216 nt1.33□□□□□ -2.2
VHR1P40522 YGR146C-AYGR146C-A 162 nt1.33□□□□□ -2.2
VHR1P40522 YPR160W-AYPR160W-A 81 nt1.33□□□□□ -2.2
VHR1P40522 YGL041C-BYGL041C-B 183 nt1.31□□□□□ -2.2
VHR1P40522 BEM3YPL115C 3387 nt1.31□□□□□ -2.2
VHR1P40522 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
VHR1P40522 RCO1YMR075W 2055 nt1.3□□□□□ -2.2
VHR1P40522 tN(GUU)QtN(GUU)Q 71 nt1.29□□□□□ -2.2
VHR1P40522 SEC1YDR164C 2175 nt1.29□□□□□ -2.2
VHR1P40522 BIR1YJR089W 2865 nt1.28□□□□□ -2.2
VHR1P40522 YDL247W-AYDL247W-A 75 nt1.28□□□□□ -2.2
VHR1P40522 YSP1YHR155W 3687 nt1.28□□□□□ -2.21
VHR1P40522 LAA1YJL207C 6045 nt1.27□□□□□ -2.21
VHR1P40522 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
VHR1P40522 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
VHR1P40522 YNL266WYNL266W 420 nt1.24□□□□□ -2.21
VHR1P40522 NST1YNL091W 3723 nt1.23□□□□□ -2.21
VHR1P40522 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
VHR1P40522 UBP3YER151C 2739 nt1.21□□□□□ -2.22
VHR1P40522 YGR130CYGR130C 2451 nt1.21□□□□□ -2.22
VHR1P40522 YBR072C-AYBR072C-A 162 nt1.2□□□□□ -2.22
VHR1P40522 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
VHR1P40522 ULP2YIL031W 3105 nt1.19□□□□□ -2.22
VHR1P40522 tH(GUG)E1tH(GUG)E1 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)E2tH(GUG)E2 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)G1tH(GUG)G1 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)G2tH(GUG)G2 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)HtH(GUG)H 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)KtH(GUG)K 72 nt1.16□□□□□ -2.22
VHR1P40522 tH(GUG)MtH(GUG)M 72 nt1.16□□□□□ -2.22
VHR1P40522 HUG1YML058W-A 207 nt1.16□□□□□ -2.22
VHR1P40522 snR81snR81 201 nt1.15□□□□□ -2.23
VHR1P40522 YAL037C-AYAL037C-A 93 nt1.15□□□□□ -2.23
VHR1P40522 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
VHR1P40522 NNF2YGR089W 2811 nt1.15□□□□□ -2.23
VHR1P40522 IML1YJR138W 4755 nt1.11□□□□□ -2.23
VHR1P40522 tS(GCU)Q1tS(GCU)Q1 86 nt1.11□□□□□ -2.23
VHR1P40522 YBR196C-AYBR196C-A 150 nt1.1□□□□□ -2.23
VHR1P40522 BEM2YER155C 6504 nt1.09□□□□□ -2.23
VHR1P40522 SEC10YLR166C 2616 nt1.09□□□□□ -2.24
VHR1P40522 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
VHR1P40522 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
VHR1P40522 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
VHR1P40522 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
VHR1P40522 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
VHR1P40522 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
VHR1P40522 tV(UAC)BtV(UAC)B 74 nt1.05□□□□□ -2.24
VHR1P40522 tV(UAC)DtV(UAC)D 74 nt1.05□□□□□ -2.24
VHR1P40522 YLL006W-AYLL006W-A 177 nt1.05□□□□□ -2.24
VHR1P40522 YIL142C-AYIL142C-A 333 nt1.03□□□□□ -2.24
VHR1P40522 YOL083C-AYOL083C-A 141 nt1.03□□□□□ -2.24
VHR1P40522 RKR1YMR247C 4689 nt1□□□□□ -2.25
VHR1P40522 YBL071C-BYBL071C-B 99 nt1□□□□□ -2.25
VHR1P40522 YPR117WYPR117W 7470 nt1□□□□□ -2.25
VHR1P40522 CSE1YGL238W 2883 nt1□□□□□ -2.25
VHR1P40522 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
VHR1P40522 YPL060C-AYPL060C-A 3315 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms