Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.48■■□□□ 1.67
COL15A1P39059 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
COL15A1P39059 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 MIR1238-201ENST00000408483 83 ntBASIC25.47■■□□□ 1.67
COL15A1P39059 NIFKP9-201ENST00000419265 221 ntBASIC25.47■■□□□ 1.67
COL15A1P39059 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.47■■□□□ 1.67
COL15A1P39059 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.47■■□□□ 1.67
COL15A1P39059 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL15A1P39059 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL15A1P39059 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.46■■□□□ 1.67
COL15A1P39059 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.46■■□□□ 1.67
COL15A1P39059 AC113347.1-201ENST00000413321 391 ntBASIC25.46■■□□□ 1.67
COL15A1P39059 AL390955.1-201ENST00000428694 934 ntBASIC25.46■■□□□ 1.67
COL15A1P39059 AC005363.2-201ENST00000618631 242 ntBASIC25.46■■□□□ 1.67
COL15A1P39059 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.46■■□□□ 1.67
COL15A1P39059 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL15A1P39059 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
COL15A1P39059 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL15A1P39059 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.46■■□□□ 1.67
COL15A1P39059 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
COL15A1P39059 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.46■■□□□ 1.67
COL15A1P39059 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL15A1P39059 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL15A1P39059 AF106564.1-201ENST00000607058 2553 ntBASIC25.45■■□□□ 1.67
COL15A1P39059 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.45■■□□□ 1.67
COL15A1P39059 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL15A1P39059 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL15A1P39059 AC005521.1-201ENST00000393351 872 ntBASIC25.45■■□□□ 1.67
COL15A1P39059 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.67
COL15A1P39059 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.45■■□□□ 1.67
COL15A1P39059 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.45■■□□□ 1.67
COL15A1P39059 PLK5-205ENST00000642079 1969 ntBASIC25.45■■□□□ 1.67
COL15A1P39059 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL15A1P39059 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.45■■□□□ 1.66
COL15A1P39059 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL15A1P39059 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL15A1P39059 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
COL15A1P39059 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.45■■□□□ 1.66
COL15A1P39059 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL15A1P39059 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
COL15A1P39059 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.44■■□□□ 1.66
COL15A1P39059 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.44■■□□□ 1.66
COL15A1P39059 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.44■■□□□ 1.66
COL15A1P39059 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.44■■□□□ 1.66
COL15A1P39059 AL049597.2-201ENST00000565575 961 ntBASIC25.44■■□□□ 1.66
COL15A1P39059 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.44■■□□□ 1.66
COL15A1P39059 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.44■■□□□ 1.66
COL15A1P39059 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.44■■□□□ 1.66
COL15A1P39059 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.44■■□□□ 1.66
COL15A1P39059 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL15A1P39059 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.44■■□□□ 1.66
COL15A1P39059 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.44■■□□□ 1.66
COL15A1P39059 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
COL15A1P39059 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.44■■□□□ 1.66
COL15A1P39059 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.43■■□□□ 1.66
COL15A1P39059 AC007375.3-201ENST00000600936 2314 ntBASIC25.43■■□□□ 1.66
COL15A1P39059 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.43■■□□□ 1.66
COL15A1P39059 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.43■■□□□ 1.66
COL15A1P39059 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.43■■□□□ 1.66
COL15A1P39059 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL15A1P39059 KRT18P57-201ENST00000443599 1254 ntBASIC25.43■■□□□ 1.66
COL15A1P39059 AC116562.2-201ENST00000507042 360 ntBASIC25.43■■□□□ 1.66
COL15A1P39059 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.43■■□□□ 1.66
COL15A1P39059 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.43■■□□□ 1.66
COL15A1P39059 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.42■■□□□ 1.66
COL15A1P39059 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.42■■□□□ 1.66
COL15A1P39059 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 CYP2D8P-201ENST00000433633 1490 ntBASIC25.42■■□□□ 1.66
COL15A1P39059 LINC01568-207ENST00000641790 1380 ntBASIC25.42■■□□□ 1.66
COL15A1P39059 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL15A1P39059 KSR1P1-201ENST00000446298 240 ntBASIC25.42■■□□□ 1.66
COL15A1P39059 FITM1-202ENST00000559294 800 ntBASIC25.42■■□□□ 1.66
COL15A1P39059 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.42■■□□□ 1.66
COL15A1P39059 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 KRT16P1-201ENST00000399124 1418 ntBASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms