Protein–RNA interactions for Protein: P38877

CTF8, Chromosome transmission fidelity protein 8, yeastyeast

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF8P38877 YHR131W-AYHR131W-A 246 nt1.51□□□□□ -2.17
CTF8P38877 YLR041WYLR041W 321 nt1.51□□□□□ -2.17
CTF8P38877 YLR232WYLR232W 348 nt1.51□□□□□ -2.17
CTF8P38877 AZF1YOR113W 2745 nt1.49□□□□□ -2.17
CTF8P38877 snR61snR61 90 nt1.49□□□□□ -2.17
CTF8P38877 BRR2YER172C 6492 nt1.49□□□□□ -2.17
CTF8P38877 tT(UGU)HtT(UGU)H 72 nt1.48□□□□□ -2.17
CTF8P38877 ASE1YOR058C 2658 nt1.48□□□□□ -2.17
CTF8P38877 NUP145YGL092W 3954 nt1.47□□□□□ -2.17
CTF8P38877 CHS1YNL192W 3396 nt1.46□□□□□ -2.18
CTF8P38877 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
CTF8P38877 EST2YLR318W 2655 nt1.44□□□□□ -2.18
CTF8P38877 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
CTF8P38877 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
CTF8P38877 STF2YGR008C 255 nt1.43□□□□□ -2.18
CTF8P38877 YHR217CYHR217C 462 nt1.43□□□□□ -2.18
CTF8P38877 SEC3YER008C 4011 nt1.42□□□□□ -2.18
CTF8P38877 YJL127W-AYJL127W-A 117 nt1.41□□□□□ -2.18
CTF8P38877 YMR247W-AYMR247W-A 144 nt1.41□□□□□ -2.18
CTF8P38877 MEC1YBR136W 7107 nt1.41□□□□□ -2.18
CTF8P38877 CCH1YGR217W 6120 nt1.41□□□□□ -2.18
CTF8P38877 CDC39YCR093W 6327 nt1.41□□□□□ -2.18
CTF8P38877 IRA1YBR140C 9279 nt1.4□□□□□ -2.18
CTF8P38877 YDR210WYDR210W 228 nt1.4□□□□□ -2.19
CTF8P38877 PRP16YKR086W 3216 nt1.4□□□□□ -2.19
CTF8P38877 SEC8YPR055W 3198 nt1.38□□□□□ -2.19
CTF8P38877 YGL041C-BYGL041C-B 183 nt1.38□□□□□ -2.19
CTF8P38877 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
CTF8P38877 COG6YNL041C 2520 nt1.36□□□□□ -2.19
CTF8P38877 KAP120YPL125W 3099 nt1.36□□□□□ -2.19
CTF8P38877 BEM3YPL115C 3387 nt1.35□□□□□ -2.19
CTF8P38877 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
CTF8P38877 RCO1YMR075W 2055 nt1.34□□□□□ -2.19
CTF8P38877 YGR146C-AYGR146C-A 162 nt1.33□□□□□ -2.2
CTF8P38877 YLR399W-AYLR399W-A 105 nt1.33□□□□□ -2.2
CTF8P38877 CAT8YMR280C 4302 nt1.33□□□□□ -2.2
CTF8P38877 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
CTF8P38877 SBH1YER087C-B 249 nt1.32□□□□□ -2.2
CTF8P38877 PET127YOR017W 2403 nt1.32□□□□□ -2.2
CTF8P38877 CDC25YLR310C 4770 nt1.32□□□□□ -2.2
CTF8P38877 YDL247W-AYDL247W-A 75 nt1.31□□□□□ -2.2
CTF8P38877 YPR160W-AYPR160W-A 81 nt1.31□□□□□ -2.2
CTF8P38877 SEC1YDR164C 2175 nt1.31□□□□□ -2.2
CTF8P38877 MSN5YDR335W 3675 nt1.3□□□□□ -2.2
CTF8P38877 BIR1YJR089W 2865 nt1.29□□□□□ -2.2
CTF8P38877 ROM2YLR371W 4071 nt1.29□□□□□ -2.2
CTF8P38877 YNL266WYNL266W 420 nt1.27□□□□□ -2.21
CTF8P38877 SPC110YDR356W 2835 nt1.27□□□□□ -2.21
CTF8P38877 FYV8YGR196C 2454 nt1.26□□□□□ -2.21
CTF8P38877 UBP3YER151C 2739 nt1.25□□□□□ -2.21
CTF8P38877 YSP1YHR155W 3687 nt1.24□□□□□ -2.21
CTF8P38877 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
CTF8P38877 YBR072C-AYBR072C-A 162 nt1.22□□□□□ -2.21
CTF8P38877 NUP192YJL039C 5052 nt1.22□□□□□ -2.21
CTF8P38877 HKR1YDR420W 5409 nt1.2□□□□□ -2.22
CTF8P38877 PIK1YNL267W 3201 nt1.2□□□□□ -2.22
CTF8P38877 CLU1YMR012W 3834 nt1.18□□□□□ -2.22
CTF8P38877 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
CTF8P38877 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
CTF8P38877 snR81snR81 201 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)E1tH(GUG)E1 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)E2tH(GUG)E2 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)G1tH(GUG)G1 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)G2tH(GUG)G2 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)HtH(GUG)H 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)KtH(GUG)K 72 nt1.17□□□□□ -2.22
CTF8P38877 tH(GUG)MtH(GUG)M 72 nt1.17□□□□□ -2.22
CTF8P38877 LAA1YJL207C 6045 nt1.17□□□□□ -2.22
CTF8P38877 NNF2YGR089W 2811 nt1.16□□□□□ -2.22
CTF8P38877 RPM2YML091C 3609 nt1.15□□□□□ -2.22
CTF8P38877 ULP2YIL031W 3105 nt1.14□□□□□ -2.23
CTF8P38877 YAL037C-AYAL037C-A 93 nt1.14□□□□□ -2.23
CTF8P38877 YGR130CYGR130C 2451 nt1.14□□□□□ -2.23
CTF8P38877 YBR196C-AYBR196C-A 150 nt1.13□□□□□ -2.23
CTF8P38877 MSH3YCR092C 3057 nt1.13□□□□□ -2.23
CTF8P38877 SAC3YDR159W 3906 nt1.12□□□□□ -2.23
CTF8P38877 tS(GCU)Q1tS(GCU)Q1 86 nt1.12□□□□□ -2.23
CTF8P38877 YOL083C-AYOL083C-A 141 nt1.11□□□□□ -2.23
CTF8P38877 SEC10YLR166C 2616 nt1.1□□□□□ -2.23
CTF8P38877 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
CTF8P38877 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
CTF8P38877 BUD3YCL014W 4911 nt1.09□□□□□ -2.23
CTF8P38877 YIL142C-AYIL142C-A 333 nt1.08□□□□□ -2.24
CTF8P38877 CSE1YGL238W 2883 nt1.07□□□□□ -2.24
CTF8P38877 ANS1YHR126C 480 nt1.05□□□□□ -2.24
CTF8P38877 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
CTF8P38877 YBL071C-BYBL071C-B 99 nt1.03□□□□□ -2.24
CTF8P38877 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
CTF8P38877 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
CTF8P38877 YLL066W-BYLL066W-B 171 nt1.02□□□□□ -2.25
CTF8P38877 EST1YLR233C 2100 nt1.01□□□□□ -2.25
CTF8P38877 tD(GUC)QtD(GUC)Q 75 nt1□□□□□ -2.25
CTF8P38877 SIP4YJL089W 2490 nt1□□□□□ -2.25
CTF8P38877 NIP1YMR309C 2439 nt0.99□□□□□ -2.25
CTF8P38877 YOR192C-BYOR192C-B 5313 nt0.99□□□□□ -2.25
CTF8P38877 YLR286W-AYLR286W-A 135 nt0.99□□□□□ -2.25
CTF8P38877 snR45snR45 172 nt0.99□□□□□ -2.25
CTF8P38877 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
CTF8P38877 snR69snR69 101 nt0.98□□□□□ -2.25
CTF8P38877 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms