Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 YBL109WYBL109W 336 nt1.53□□□□□ -2.16
RPD3P32561 AZF1YOR113W 2745 nt1.53□□□□□ -2.17
RPD3P32561 MON2YNL297C 4911 nt1.52□□□□□ -2.17
RPD3P32561 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
RPD3P32561 PMD1YER132C 5262 nt1.51□□□□□ -2.17
RPD3P32561 tM(CAU)Q2tM(CAU)Q2 78 nt1.51□□□□□ -2.17
RPD3P32561 EST2YLR318W 2655 nt1.5□□□□□ -2.17
RPD3P32561 RAD9YDR217C 3930 nt1.5□□□□□ -2.17
RPD3P32561 snR61snR61 90 nt1.49□□□□□ -2.17
RPD3P32561 PEP1YBL017C 4740 nt1.49□□□□□ -2.17
RPD3P32561 SEC8YPR055W 3198 nt1.48□□□□□ -2.17
RPD3P32561 YNL103W-AYNL103W-A 90 nt1.48□□□□□ -2.17
RPD3P32561 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
RPD3P32561 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
RPD3P32561 GEA2YEL022W 4380 nt1.47□□□□□ -2.17
RPD3P32561 MSN5YDR335W 3675 nt1.46□□□□□ -2.18
RPD3P32561 YMR272W-BYMR272W-B 108 nt1.46□□□□□ -2.18
RPD3P32561 snR39BsnR39B 96 nt1.46□□□□□ -2.18
RPD3P32561 NUP157YER105C 4176 nt1.46□□□□□ -2.18
RPD3P32561 YHR131W-AYHR131W-A 246 nt1.45□□□□□ -2.18
RPD3P32561 NUP188YML103C 4968 nt1.44□□□□□ -2.18
RPD3P32561 BRR2YER172C 6492 nt1.44□□□□□ -2.18
RPD3P32561 YHR217CYHR217C 462 nt1.44□□□□□ -2.18
RPD3P32561 TRM732YMR259C 4263 nt1.43□□□□□ -2.18
RPD3P32561 SXM1YDR395W 2835 nt1.43□□□□□ -2.18
RPD3P32561 SBH1YER087C-B 249 nt1.43□□□□□ -2.18
RPD3P32561 YLR399W-AYLR399W-A 105 nt1.43□□□□□ -2.18
RPD3P32561 IRA1YBR140C 9279 nt1.42□□□□□ -2.18
RPD3P32561 SSK2YNR031C 4740 nt1.42□□□□□ -2.18
RPD3P32561 CFT1YDR301W 4074 nt1.42□□□□□ -2.18
RPD3P32561 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
RPD3P32561 PET127YOR017W 2403 nt1.39□□□□□ -2.19
RPD3P32561 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
RPD3P32561 YGR146C-AYGR146C-A 162 nt1.39□□□□□ -2.19
RPD3P32561 YJL127W-AYJL127W-A 117 nt1.39□□□□□ -2.19
RPD3P32561 KAP120YPL125W 3099 nt1.39□□□□□ -2.19
RPD3P32561 NUP192YJL039C 5052 nt1.39□□□□□ -2.19
RPD3P32561 BEM3YPL115C 3387 nt1.38□□□□□ -2.19
RPD3P32561 YPR160W-AYPR160W-A 81 nt1.37□□□□□ -2.19
RPD3P32561 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
RPD3P32561 COG6YNL041C 2520 nt1.37□□□□□ -2.19
RPD3P32561 MEC1YBR136W 7107 nt1.37□□□□□ -2.19
RPD3P32561 YDR210WYDR210W 228 nt1.36□□□□□ -2.19
RPD3P32561 YSP1YHR155W 3687 nt1.36□□□□□ -2.19
RPD3P32561 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
RPD3P32561 PIK1YNL267W 3201 nt1.36□□□□□ -2.19
RPD3P32561 CCH1YGR217W 6120 nt1.35□□□□□ -2.19
RPD3P32561 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
RPD3P32561 YDL073WYDL073W 2955 nt1.31□□□□□ -2.2
RPD3P32561 YDL247W-AYDL247W-A 75 nt1.31□□□□□ -2.2
RPD3P32561 BIR1YJR089W 2865 nt1.3□□□□□ -2.2
RPD3P32561 YGL041C-BYGL041C-B 183 nt1.3□□□□□ -2.2
RPD3P32561 SEC1YDR164C 2175 nt1.3□□□□□ -2.2
RPD3P32561 UBP3YER151C 2739 nt1.29□□□□□ -2.2
RPD3P32561 tN(GUU)QtN(GUU)Q 71 nt1.28□□□□□ -2.2
RPD3P32561 ULP2YIL031W 3105 nt1.26□□□□□ -2.21
RPD3P32561 YNL266WYNL266W 420 nt1.26□□□□□ -2.21
RPD3P32561 GLG1YKR058W 1851 nt1.26□□□□□ -2.21
RPD3P32561 YNL284C-BYNL284C-B 5268 nt1.25□□□□□ -2.21
RPD3P32561 RCO1YMR075W 2055 nt1.24□□□□□ -2.21
RPD3P32561 CAT8YMR280C 4302 nt1.22□□□□□ -2.21
RPD3P32561 YBR072C-AYBR072C-A 162 nt1.21□□□□□ -2.22
RPD3P32561 HUG1YML058W-A 207 nt1.2□□□□□ -2.22
RPD3P32561 YGR130CYGR130C 2451 nt1.17□□□□□ -2.22
RPD3P32561 NST1YNL091W 3723 nt1.16□□□□□ -2.22
RPD3P32561 YAL037C-AYAL037C-A 93 nt1.16□□□□□ -2.22
RPD3P32561 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
RPD3P32561 NNF2YGR089W 2811 nt1.14□□□□□ -2.23
RPD3P32561 snR81snR81 201 nt1.13□□□□□ -2.23
RPD3P32561 MSH3YCR092C 3057 nt1.13□□□□□ -2.23
RPD3P32561 YBR196C-AYBR196C-A 150 nt1.12□□□□□ -2.23
RPD3P32561 SEC10YLR166C 2616 nt1.11□□□□□ -2.23
RPD3P32561 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
RPD3P32561 LAA1YJL207C 6045 nt1.1□□□□□ -2.23
RPD3P32561 tH(GUG)E1tH(GUG)E1 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)E2tH(GUG)E2 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)G1tH(GUG)G1 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)G2tH(GUG)G2 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)HtH(GUG)H 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)KtH(GUG)K 72 nt1.09□□□□□ -2.23
RPD3P32561 tH(GUG)MtH(GUG)M 72 nt1.09□□□□□ -2.23
RPD3P32561 LTE1YAL024C 4308 nt1.09□□□□□ -2.24
RPD3P32561 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
RPD3P32561 tS(GCU)Q1tS(GCU)Q1 86 nt1.07□□□□□ -2.24
RPD3P32561 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
RPD3P32561 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
RPD3P32561 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
RPD3P32561 CSE1YGL238W 2883 nt1.03□□□□□ -2.24
RPD3P32561 tV(UAC)BtV(UAC)B 74 nt1.03□□□□□ -2.24
RPD3P32561 tV(UAC)DtV(UAC)D 74 nt1.03□□□□□ -2.24
RPD3P32561 IML1YJR138W 4755 nt1.01□□□□□ -2.25
RPD3P32561 YOL083C-AYOL083C-A 141 nt1.01□□□□□ -2.25
RPD3P32561 MYO1YHR023W 5787 nt1□□□□□ -2.25
RPD3P32561 YIL142C-AYIL142C-A 333 nt1□□□□□ -2.25
RPD3P32561 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
RPD3P32561 tD(GUC)QtD(GUC)Q 75 nt0.99□□□□□ -2.25
RPD3P32561 YPL060C-AYPL060C-A 3315 nt0.99□□□□□ -2.25
RPD3P32561 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
RPD3P32561 YJL077W-AYJL077W-A 87 nt0.98□□□□□ -2.25
RPD3P32561 snR69snR69 101 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms