Protein–RNA interactions for Protein: P22336

RFA1, Replication factor A protein 1, yeastyeast

Known RBP Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFA1P22336 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
RFA1P22336 YCR095W-AYCR095W-A 159 nt1.53□□□□□ -2.16
RFA1P22336 PRP16YKR086W 3216 nt1.53□□□□□ -2.17
RFA1P22336 FYV10YIL097W 1551 nt1.52□□□□□ -2.17
RFA1P22336 AZF1YOR113W 2745 nt1.51□□□□□ -2.17
RFA1P22336 YNL067W-BYNL067W-B 141 nt1.5□□□□□ -2.17
RFA1P22336 YBR099CYBR099C 384 nt1.5□□□□□ -2.17
RFA1P22336 snR39BsnR39B 96 nt1.5□□□□□ -2.17
RFA1P22336 SEC21YNL287W 2808 nt1.49□□□□□ -2.17
RFA1P22336 QCR9YGR183C 201 nt1.47□□□□□ -2.17
RFA1P22336 COG6YNL041C 2520 nt1.47□□□□□ -2.17
RFA1P22336 SOM1YEL059C-A 225 nt1.46□□□□□ -2.18
RFA1P22336 YLR232WYLR232W 348 nt1.46□□□□□ -2.18
RFA1P22336 YBR178WYBR178W 375 nt1.46□□□□□ -2.18
RFA1P22336 YDL073WYDL073W 2955 nt1.46□□□□□ -2.18
RFA1P22336 GEA2YEL022W 4380 nt1.45□□□□□ -2.18
RFA1P22336 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
RFA1P22336 YDR524C-AYDR524C-A 120 nt1.44□□□□□ -2.18
RFA1P22336 YHR131W-AYHR131W-A 246 nt1.44□□□□□ -2.18
RFA1P22336 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
RFA1P22336 YDR544CYDR544C 429 nt1.43□□□□□ -2.18
RFA1P22336 YBL109WYBL109W 336 nt1.43□□□□□ -2.18
RFA1P22336 SXM1YDR395W 2835 nt1.42□□□□□ -2.18
RFA1P22336 STF2YGR008C 255 nt1.42□□□□□ -2.18
RFA1P22336 PMP2YEL017C-A 132 nt1.4□□□□□ -2.19
RFA1P22336 YLR399W-AYLR399W-A 105 nt1.4□□□□□ -2.19
RFA1P22336 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
RFA1P22336 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
RFA1P22336 YNL103W-AYNL103W-A 90 nt1.39□□□□□ -2.19
RFA1P22336 MSH3YCR092C 3057 nt1.39□□□□□ -2.19
RFA1P22336 PET127YOR017W 2403 nt1.38□□□□□ -2.19
RFA1P22336 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
RFA1P22336 YDR210WYDR210W 228 nt1.38□□□□□ -2.19
RFA1P22336 TFB5YDR079C-A 219 nt1.37□□□□□ -2.19
RFA1P22336 SSK2YNR031C 4740 nt1.36□□□□□ -2.19
RFA1P22336 snR61snR61 90 nt1.35□□□□□ -2.19
RFA1P22336 PIK1YNL267W 3201 nt1.35□□□□□ -2.19
RFA1P22336 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
RFA1P22336 YMR326CYMR326C 309 nt1.34□□□□□ -2.19
RFA1P22336 SEC1YDR164C 2175 nt1.34□□□□□ -2.2
RFA1P22336 NUP192YJL039C 5052 nt1.33□□□□□ -2.2
RFA1P22336 YGR146C-AYGR146C-A 162 nt1.32□□□□□ -2.2
RFA1P22336 BRR2YER172C 6492 nt1.31□□□□□ -2.2
RFA1P22336 YPL060C-AYPL060C-A 3315 nt1.31□□□□□ -2.2
RFA1P22336 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
RFA1P22336 CCH1YGR217W 6120 nt1.31□□□□□ -2.2
RFA1P22336 RCO1YMR075W 2055 nt1.3□□□□□ -2.2
RFA1P22336 YSP1YHR155W 3687 nt1.3□□□□□ -2.2
RFA1P22336 tQ(UUG)E2tQ(UUG)E2 72 nt1.29□□□□□ -2.2
RFA1P22336 YHR217CYHR217C 462 nt1.28□□□□□ -2.2
RFA1P22336 YJL127W-AYJL127W-A 117 nt1.28□□□□□ -2.2
RFA1P22336 CAT8YMR280C 4302 nt1.27□□□□□ -2.21
RFA1P22336 SBH1YER087C-B 249 nt1.26□□□□□ -2.21
RFA1P22336 BIR1YJR089W 2865 nt1.26□□□□□ -2.21
RFA1P22336 ULP2YIL031W 3105 nt1.24□□□□□ -2.21
RFA1P22336 LAA1YJL207C 6045 nt1.24□□□□□ -2.21
RFA1P22336 YGR130CYGR130C 2451 nt1.21□□□□□ -2.22
RFA1P22336 NNF2YGR089W 2811 nt1.21□□□□□ -2.22
RFA1P22336 BEM3YPL115C 3387 nt1.2□□□□□ -2.22
RFA1P22336 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
RFA1P22336 NST1YNL091W 3723 nt1.18□□□□□ -2.22
RFA1P22336 UBP3YER151C 2739 nt1.18□□□□□ -2.22
RFA1P22336 YNL266WYNL266W 420 nt1.18□□□□□ -2.22
RFA1P22336 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
RFA1P22336 YGL041C-BYGL041C-B 183 nt1.17□□□□□ -2.22
RFA1P22336 YBR072C-AYBR072C-A 162 nt1.17□□□□□ -2.22
RFA1P22336 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.23
RFA1P22336 YPR117WYPR117W 7470 nt1.13□□□□□ -2.23
RFA1P22336 BUL2YML111W 2763 nt1.1□□□□□ -2.23
RFA1P22336 RKR1YMR247C 4689 nt1.08□□□□□ -2.24
RFA1P22336 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
RFA1P22336 snR81snR81 201 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)E1tH(GUG)E1 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)E2tH(GUG)E2 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)G1tH(GUG)G1 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)G2tH(GUG)G2 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)HtH(GUG)H 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)KtH(GUG)K 72 nt1.07□□□□□ -2.24
RFA1P22336 tH(GUG)MtH(GUG)M 72 nt1.07□□□□□ -2.24
RFA1P22336 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
RFA1P22336 YDL247W-AYDL247W-A 75 nt1.05□□□□□ -2.24
RFA1P22336 YAL037C-AYAL037C-A 93 nt1.05□□□□□ -2.24
RFA1P22336 SEC10YLR166C 2616 nt1.04□□□□□ -2.24
RFA1P22336 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
RFA1P22336 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
RFA1P22336 IML1YJR138W 4755 nt1.03□□□□□ -2.25
RFA1P22336 VAM6YDL077C 3150 nt1.02□□□□□ -2.25
RFA1P22336 YBR196C-AYBR196C-A 150 nt1.01□□□□□ -2.25
RFA1P22336 tS(GCU)Q1tS(GCU)Q1 86 nt1□□□□□ -2.25
RFA1P22336 NIP1YMR309C 2439 nt0.99□□□□□ -2.25
RFA1P22336 LTE1YAL024C 4308 nt0.99□□□□□ -2.25
RFA1P22336 tV(UAC)BtV(UAC)B 74 nt0.99□□□□□ -2.25
RFA1P22336 tV(UAC)DtV(UAC)D 74 nt0.99□□□□□ -2.25
RFA1P22336 ANS1YHR126C 480 nt0.97□□□□□ -2.25
RFA1P22336 CSE1YGL238W 2883 nt0.97□□□□□ -2.25
RFA1P22336 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
RFA1P22336 DOP1YDR141C 5097 nt0.96□□□□□ -2.26
RFA1P22336 EST1YLR233C 2100 nt0.95□□□□□ -2.26
RFA1P22336 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
RFA1P22336 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms