Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC12.39□□□□□ -0.43
PDE6GP18545 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
PDE6GP18545 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PDE6GP18545 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PDE6GP18545 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PDE6GP18545 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
PDE6GP18545 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 AL032819.2-201ENST00000624543 2162 ntBASIC12.39□□□□□ -0.43
PDE6GP18545 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 AL390961.4-201ENST00000623958 2535 ntBASIC12.39□□□□□ -0.43
PDE6GP18545 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
PDE6GP18545 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
PDE6GP18545 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PDE6GP18545 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6GP18545 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 TREX1-205ENST00000625293 1783 ntBASIC12.38□□□□□ -0.43
PDE6GP18545 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PDE6GP18545 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6GP18545 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6GP18545 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6GP18545 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PDE6GP18545 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
PDE6GP18545 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC12.37□□□□□ -0.43
PDE6GP18545 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.37□□□□□ -0.43
PDE6GP18545 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.37□□□□□ -0.43
PDE6GP18545 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PDE6GP18545 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
PDE6GP18545 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6GP18545 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6GP18545 AC009102.2-201ENST00000606772 1639 ntBASIC12.37□□□□□ -0.43
PDE6GP18545 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PDE6GP18545 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms