Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
ERCC2P18074 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC2P18074 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.59■□□□□ 0.89
ERCC2P18074 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC2P18074 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ERCC2P18074 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.58■□□□□ 0.89
ERCC2P18074 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.58■□□□□ 0.89
ERCC2P18074 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.58■□□□□ 0.89
ERCC2P18074 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.58■□□□□ 0.89
ERCC2P18074 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC2P18074 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.58■□□□□ 0.89
ERCC2P18074 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.58■□□□□ 0.89
ERCC2P18074 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ERCC2P18074 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC2P18074 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC2P18074 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC2P18074 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC2P18074 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ERCC2P18074 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
ERCC2P18074 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC2P18074 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ERCC2P18074 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC2P18074 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 KRT16P6-202ENST00000425692 1426 ntBASIC20.57■□□□□ 0.88
ERCC2P18074 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC2P18074 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC2P18074 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ERCC2P18074 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ERCC2P18074 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC2P18074 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC2P18074 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.56■□□□□ 0.88
ERCC2P18074 AC005829.2-201ENST00000571422 1056 ntBASIC20.56■□□□□ 0.88
ERCC2P18074 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 HLA-B-256ENST00000639848 1089 ntBASIC20.56■□□□□ 0.88
ERCC2P18074 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.56■□□□□ 0.88
ERCC2P18074 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.56■□□□□ 0.88
ERCC2P18074 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC2P18074 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ERCC2P18074 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ERCC2P18074 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ERCC2P18074 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.55■□□□□ 0.88
ERCC2P18074 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC2P18074 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC2P18074 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.55■□□□□ 0.88
ERCC2P18074 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC2P18074 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC2P18074 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms