Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CYP3A4P08684 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CYP3A4P08684 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CYP3A4P08684 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CYP3A4P08684 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CYP3A4P08684 AC116351.2-201ENST00000606540 1585 ntBASIC22.55■■□□□ 1.2
CYP3A4P08684 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.54■■□□□ 1.2
CYP3A4P08684 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.54■■□□□ 1.2
CYP3A4P08684 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.54■■□□□ 1.2
CYP3A4P08684 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CYP3A4P08684 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CYP3A4P08684 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.54■■□□□ 1.2
CYP3A4P08684 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.54■■□□□ 1.2
CYP3A4P08684 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
CYP3A4P08684 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CYP3A4P08684 AC124016.1-201ENST00000609552 612 ntBASIC22.54■■□□□ 1.2
CYP3A4P08684 AL023875.1-201ENST00000640777 796 ntBASIC22.54■■□□□ 1.2
CYP3A4P08684 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP3A4P08684 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.54■■□□□ 1.2
CYP3A4P08684 LINC01006-201ENST00000333319 2292 ntBASIC22.54■■□□□ 1.2
CYP3A4P08684 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 AL157384.1-201ENST00000445995 2473 ntBASIC22.53■■□□□ 1.2
CYP3A4P08684 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.53■■□□□ 1.2
CYP3A4P08684 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CYP3A4P08684 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.53■■□□□ 1.2
CYP3A4P08684 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.53■■□□□ 1.2
CYP3A4P08684 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP3A4P08684 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CYP3A4P08684 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP3A4P08684 AL158047.1-201ENST00000445918 881 ntBASIC22.52■■□□□ 1.2
CYP3A4P08684 PRKY-204ENST00000533551 1019 ntBASIC22.52■■□□□ 1.2
CYP3A4P08684 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.52■■□□□ 1.2
CYP3A4P08684 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP3A4P08684 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP3A4P08684 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP3A4P08684 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.52■■□□□ 1.19
CYP3A4P08684 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.51■■□□□ 1.19
CYP3A4P08684 TFP1-202ENST00000475455 1573 ntBASIC22.51■■□□□ 1.19
CYP3A4P08684 PHGDH-210ENST00000641115 1638 ntBASIC22.51■■□□□ 1.19
CYP3A4P08684 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.51■■□□□ 1.19
CYP3A4P08684 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.51■■□□□ 1.19
CYP3A4P08684 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.51■■□□□ 1.19
CYP3A4P08684 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP3A4P08684 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
CYP3A4P08684 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.5■■□□□ 1.19
CYP3A4P08684 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CYP3A4P08684 AC239809.2-201ENST00000415381 517 ntBASIC22.5■■□□□ 1.19
CYP3A4P08684 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.5■■□□□ 1.19
CYP3A4P08684 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.5■■□□□ 1.19
CYP3A4P08684 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.5■■□□□ 1.19
CYP3A4P08684 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.5■■□□□ 1.19
CYP3A4P08684 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.5■■□□□ 1.19
CYP3A4P08684 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.5■■□□□ 1.19
CYP3A4P08684 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CYP3A4P08684 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP3A4P08684 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP3A4P08684 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
CYP3A4P08684 AC018553.1-201ENST00000616682 1458 ntBASIC22.49■■□□□ 1.19
CYP3A4P08684 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP3A4P08684 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CYP3A4P08684 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms