Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.57■□□□□ 0.24
CTSDP07339 AL139246.5-201ENST00000606645 996 ntBASIC16.57■□□□□ 0.24
CTSDP07339 AL355001.2-201ENST00000620617 1191 ntBASIC16.57■□□□□ 0.24
CTSDP07339 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CTSDP07339 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSDP07339 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSDP07339 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSDP07339 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSDP07339 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSDP07339 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTSDP07339 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSDP07339 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSDP07339 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSDP07339 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.56■□□□□ 0.24
CTSDP07339 AL354811.1-201ENST00000610286 706 ntBASIC16.56■□□□□ 0.24
CTSDP07339 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.56■□□□□ 0.24
CTSDP07339 AC106739.1-201ENST00000617035 715 ntBASIC16.56■□□□□ 0.24
CTSDP07339 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSDP07339 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSDP07339 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSDP07339 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
CTSDP07339 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSDP07339 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSDP07339 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSDP07339 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CTSDP07339 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTSDP07339 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.55■□□□□ 0.24
CTSDP07339 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CTSDP07339 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.55■□□□□ 0.24
CTSDP07339 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CTSDP07339 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSDP07339 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 RASA4CP-201ENST00000424092 1398 ntBASIC16.54■□□□□ 0.24
CTSDP07339 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 AC120498.9-201ENST00000339021 3867 ntBASIC16.54■□□□□ 0.24
CTSDP07339 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 AC091799.1-201ENST00000422823 811 ntBASIC16.54■□□□□ 0.24
CTSDP07339 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CTSDP07339 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.54■□□□□ 0.24
CTSDP07339 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSDP07339 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.54■□□□□ 0.24
CTSDP07339 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CTSDP07339 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms