Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CHGBP05060 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.1■■□□□ 1.45
CHGBP05060 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.1■■□□□ 1.45
CHGBP05060 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.1■■□□□ 1.45
CHGBP05060 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHGBP05060 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.09■■□□□ 1.45
CHGBP05060 BX119927.1-201ENST00000636596 1552 ntBASIC24.09■■□□□ 1.45
CHGBP05060 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.09■■□□□ 1.45
CHGBP05060 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.09■■□□□ 1.45
CHGBP05060 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHGBP05060 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHGBP05060 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.09■■□□□ 1.45
CHGBP05060 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CHGBP05060 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHGBP05060 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.09■■□□□ 1.45
CHGBP05060 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHGBP05060 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CHGBP05060 KRT8P20-201ENST00000423953 1409 ntBASIC24.09■■□□□ 1.45
CHGBP05060 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.09■■□□□ 1.45
CHGBP05060 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHGBP05060 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.08■■□□□ 1.45
CHGBP05060 LINC01521-201ENST00000504184 1943 ntBASIC24.08■■□□□ 1.45
CHGBP05060 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CHGBP05060 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
CHGBP05060 POM121L13P-201ENST00000422362 380 ntBASIC24.08■■□□□ 1.45
CHGBP05060 RPS2P52-201ENST00000469610 820 ntBASIC24.08■■□□□ 1.45
CHGBP05060 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.08■■□□□ 1.45
CHGBP05060 AC069544.1-201ENST00000609399 999 ntBASIC24.08■■□□□ 1.45
CHGBP05060 TMEM191A-211ENST00000637163 1067 ntBASIC24.08■■□□□ 1.45
CHGBP05060 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.08■■□□□ 1.45
CHGBP05060 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.08■■□□□ 1.45
CHGBP05060 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.08■■□□□ 1.45
CHGBP05060 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHGBP05060 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
CHGBP05060 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CHGBP05060 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.07■■□□□ 1.44
CHGBP05060 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CHGBP05060 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.07■■□□□ 1.44
CHGBP05060 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.07■■□□□ 1.44
CHGBP05060 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHGBP05060 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.06■■□□□ 1.44
CHGBP05060 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 KRT18P29-201ENST00000397031 1267 ntBASIC24.06■■□□□ 1.44
CHGBP05060 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.06■■□□□ 1.44
CHGBP05060 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.06■■□□□ 1.44
CHGBP05060 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHGBP05060 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CHGBP05060 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHGBP05060 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CHGBP05060 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.05■■□□□ 1.44
CHGBP05060 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.05■■□□□ 1.44
CHGBP05060 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHGBP05060 AL390719.1-204ENST00000412397 1219 ntBASIC24.05■■□□□ 1.44
CHGBP05060 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.05■■□□□ 1.44
CHGBP05060 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.05■■□□□ 1.44
CHGBP05060 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.05■■□□□ 1.44
CHGBP05060 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.05■■□□□ 1.44
CHGBP05060 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.05■■□□□ 1.44
CHGBP05060 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.05■■□□□ 1.44
CHGBP05060 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHGBP05060 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms