Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV3P03979 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV3P03979 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRGV3P03979 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRGV3P03979 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TRGV3P03979 SMG8-203ENST00000578922 2178 ntBASIC15.71■□□□□ 0.11
TRGV3P03979 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.71■□□□□ 0.11
TRGV3P03979 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TRGV3P03979 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.71■□□□□ 0.11
TRGV3P03979 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRGV3P03979 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.71■□□□□ 0.11
TRGV3P03979 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV3P03979 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRGV3P03979 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV3P03979 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRGV3P03979 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRGV3P03979 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.71■□□□□ 0.1
TRGV3P03979 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TRGV3P03979 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.71■□□□□ 0.1
TRGV3P03979 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRGV3P03979 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV3P03979 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV3P03979 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRGV3P03979 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV3P03979 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.7■□□□□ 0.1
TRGV3P03979 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV3P03979 MYC-209ENST00000641252 345 ntBASIC15.7■□□□□ 0.1
TRGV3P03979 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV3P03979 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV3P03979 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV3P03979 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV3P03979 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV3P03979 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRGV3P03979 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV3P03979 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV3P03979 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV3P03979 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV3P03979 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TRGV3P03979 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV3P03979 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRGV3P03979 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 HLA-G-202ENST00000376815 851 ntBASIC15.68■□□□□ 0.1
TRGV3P03979 HLA-G-203ENST00000376818 1127 ntBASIC15.68■□□□□ 0.1
TRGV3P03979 AL390719.1-204ENST00000412397 1219 ntBASIC15.68■□□□□ 0.1
TRGV3P03979 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.68■□□□□ 0.1
TRGV3P03979 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV3P03979 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.68■□□□□ 0.1
TRGV3P03979 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.68■□□□□ 0.1
TRGV3P03979 AC083880.1-201ENST00000608266 535 ntBASIC15.68■□□□□ 0.1
TRGV3P03979 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRGV3P03979 LINC01521-201ENST00000504184 1943 ntBASIC15.68■□□□□ 0.1
TRGV3P03979 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms