Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
IFNB1P01574 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.65■□□□□ 0.9
IFNB1P01574 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNB1P01574 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.65■□□□□ 0.9
IFNB1P01574 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
IFNB1P01574 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNB1P01574 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
IFNB1P01574 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNB1P01574 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
IFNB1P01574 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
IFNB1P01574 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFNB1P01574 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
IFNB1P01574 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFNB1P01574 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.64■□□□□ 0.89
IFNB1P01574 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
IFNB1P01574 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.64■□□□□ 0.89
IFNB1P01574 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.64■□□□□ 0.89
IFNB1P01574 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
IFNB1P01574 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
IFNB1P01574 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.64■□□□□ 0.89
IFNB1P01574 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IFNB1P01574 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
IFNB1P01574 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNB1P01574 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.63■□□□□ 0.89
IFNB1P01574 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.63■□□□□ 0.89
IFNB1P01574 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
IFNB1P01574 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
IFNB1P01574 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.63■□□□□ 0.89
IFNB1P01574 AC016769.1-201ENST00000409132 1010 ntBASIC20.63■□□□□ 0.89
IFNB1P01574 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.63■□□□□ 0.89
IFNB1P01574 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 AC007322.4-201ENST00000509611 723 ntBASIC20.63■□□□□ 0.89
IFNB1P01574 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
IFNB1P01574 AL162412.1-201ENST00000567129 965 ntBASIC20.63■□□□□ 0.89
IFNB1P01574 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.63■□□□□ 0.89
IFNB1P01574 MFSD11-216ENST00000590393 1141 ntBASIC20.63■□□□□ 0.89
IFNB1P01574 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.63■□□□□ 0.89
IFNB1P01574 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.63■□□□□ 0.89
IFNB1P01574 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNB1P01574 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 KRT18P5-201ENST00000436075 1291 ntBASIC20.62■□□□□ 0.89
IFNB1P01574 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
IFNB1P01574 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.62■□□□□ 0.89
IFNB1P01574 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
IFNB1P01574 AC116562.4-201ENST00000641316 2276 ntBASIC20.62■□□□□ 0.89
IFNB1P01574 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.62■□□□□ 0.89
IFNB1P01574 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.62■□□□□ 0.89
IFNB1P01574 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFNB1P01574 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.62■□□□□ 0.89
IFNB1P01574 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IFNB1P01574 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFNB1P01574 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNB1P01574 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNB1P01574 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFNB1P01574 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.61■□□□□ 0.89
IFNB1P01574 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNB1P01574 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.61■□□□□ 0.89
IFNB1P01574 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
IFNB1P01574 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
IFNB1P01574 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IFNB1P01574 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.61■□□□□ 0.89
IFNB1P01574 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
IFNB1P01574 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.61■□□□□ 0.89
IFNB1P01574 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNB1P01574 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.6■□□□□ 0.89
IFNB1P01574 TMEM179-206ENST00000616017 1645 ntBASIC20.6■□□□□ 0.89
IFNB1P01574 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNB1P01574 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNB1P01574 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.6■□□□□ 0.89
IFNB1P01574 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IFNB1P01574 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNB1P01574 AC120498.9-201ENST00000339021 3867 ntBASIC20.6■□□□□ 0.89
IFNB1P01574 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNB1P01574 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms