Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE6O95741 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.6■□□□□ 0.73
CPNE6O95741 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CPNE6O95741 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CPNE6O95741 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.6■□□□□ 0.73
CPNE6O95741 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.6■□□□□ 0.73
CPNE6O95741 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE6O95741 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 AC005829.2-201ENST00000571422 1056 ntBASIC19.6■□□□□ 0.73
CPNE6O95741 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE6O95741 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CPNE6O95741 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE6O95741 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE6O95741 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.59■□□□□ 0.73
CPNE6O95741 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CPNE6O95741 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CPNE6O95741 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 AL390719.1-204ENST00000412397 1219 ntBASIC19.59■□□□□ 0.73
CPNE6O95741 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.59■□□□□ 0.73
CPNE6O95741 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE6O95741 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE6O95741 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE6O95741 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE6O95741 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE6O95741 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CPNE6O95741 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE6O95741 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE6O95741 AC011484.1-201ENST00000377652 1995 ntBASIC19.58■□□□□ 0.73
CPNE6O95741 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CPNE6O95741 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CPNE6O95741 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CPNE6O95741 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CPNE6O95741 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.58■□□□□ 0.72
CPNE6O95741 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE6O95741 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.58■□□□□ 0.72
CPNE6O95741 AC120498.8-201ENST00000614275 531 ntBASIC19.58■□□□□ 0.72
CPNE6O95741 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CPNE6O95741 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE6O95741 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CPNE6O95741 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE6O95741 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.58■□□□□ 0.72
CPNE6O95741 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.58■□□□□ 0.72
CPNE6O95741 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE6O95741 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CPNE6O95741 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE6O95741 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE6O95741 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CPNE6O95741 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CPNE6O95741 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE6O95741 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE6O95741 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
CPNE6O95741 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE6O95741 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms