Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ABCA1O95477 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ABCA1O95477 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.74■□□□□ 0.27
ABCA1O95477 AL353807.1-201ENST00000427475 662 ntBASIC16.74■□□□□ 0.27
ABCA1O95477 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.74■□□□□ 0.27
ABCA1O95477 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ABCA1O95477 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.74■□□□□ 0.27
ABCA1O95477 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.74■□□□□ 0.27
ABCA1O95477 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.74■□□□□ 0.27
ABCA1O95477 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.73■□□□□ 0.27
ABCA1O95477 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.73■□□□□ 0.27
ABCA1O95477 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.73■□□□□ 0.27
ABCA1O95477 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.73■□□□□ 0.27
ABCA1O95477 AC145285.6-201ENST00000604632 637 ntBASIC16.73■□□□□ 0.27
ABCA1O95477 AC124283.5-201ENST00000624661 1809 ntBASIC16.73■□□□□ 0.27
ABCA1O95477 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ABCA1O95477 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ABCA1O95477 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.73■□□□□ 0.27
ABCA1O95477 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.73■□□□□ 0.27
ABCA1O95477 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.73■□□□□ 0.27
ABCA1O95477 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.73■□□□□ 0.27
ABCA1O95477 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ABCA1O95477 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.73■□□□□ 0.27
ABCA1O95477 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.72■□□□□ 0.27
ABCA1O95477 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.72■□□□□ 0.27
ABCA1O95477 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ABCA1O95477 KRT18P57-201ENST00000443599 1254 ntBASIC16.72■□□□□ 0.27
ABCA1O95477 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.72■□□□□ 0.27
ABCA1O95477 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
ABCA1O95477 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ABCA1O95477 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.72■□□□□ 0.27
ABCA1O95477 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
ABCA1O95477 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 NBPF21P-201ENST00000425093 1451 ntBASIC16.71■□□□□ 0.27
ABCA1O95477 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.71■□□□□ 0.27
ABCA1O95477 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.71■□□□□ 0.27
ABCA1O95477 AF186192.3-201ENST00000583427 947 ntBASIC16.71■□□□□ 0.27
ABCA1O95477 AC026471.5-201ENST00000615068 467 ntBASIC16.71■□□□□ 0.27
ABCA1O95477 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.71■□□□□ 0.27
ABCA1O95477 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ABCA1O95477 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms