Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.04■□□□□ 0.96
BEST1O76090 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BEST1O76090 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.03■□□□□ 0.96
BEST1O76090 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.03■□□□□ 0.96
BEST1O76090 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.03■□□□□ 0.96
BEST1O76090 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
BEST1O76090 C1QBPP2-201ENST00000528754 825 ntBASIC21.03■□□□□ 0.96
BEST1O76090 AC142381.4-202ENST00000563973 229 ntBASIC21.03■□□□□ 0.96
BEST1O76090 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.03■□□□□ 0.96
BEST1O76090 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.03■□□□□ 0.96
BEST1O76090 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BEST1O76090 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
BEST1O76090 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.03■□□□□ 0.96
BEST1O76090 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.02■□□□□ 0.96
BEST1O76090 BX119927.1-201ENST00000636596 1552 ntBASIC21.02■□□□□ 0.96
BEST1O76090 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.02■□□□□ 0.96
BEST1O76090 AL158047.1-201ENST00000445918 881 ntBASIC21.02■□□□□ 0.96
BEST1O76090 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.02■□□□□ 0.96
BEST1O76090 AL359736.2-201ENST00000621992 437 ntBASIC21.02■□□□□ 0.96
BEST1O76090 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.02■□□□□ 0.96
BEST1O76090 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BEST1O76090 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
BEST1O76090 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BEST1O76090 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BEST1O76090 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.01■□□□□ 0.95
BEST1O76090 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BEST1O76090 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.01■□□□□ 0.95
BEST1O76090 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
BEST1O76090 RPPH1-201ENST00000516869 333 ntBASIC21.01■□□□□ 0.95
BEST1O76090 AL023875.1-201ENST00000640777 796 ntBASIC21.01■□□□□ 0.95
BEST1O76090 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BEST1O76090 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.01■□□□□ 0.95
BEST1O76090 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.01■□□□□ 0.95
BEST1O76090 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
BEST1O76090 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21■□□□□ 0.95
BEST1O76090 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21■□□□□ 0.95
BEST1O76090 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
BEST1O76090 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21■□□□□ 0.95
BEST1O76090 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21■□□□□ 0.95
BEST1O76090 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21■□□□□ 0.95
BEST1O76090 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21■□□□□ 0.95
BEST1O76090 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BEST1O76090 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21■□□□□ 0.95
BEST1O76090 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21■□□□□ 0.95
BEST1O76090 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST1O76090 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST1O76090 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST1O76090 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.99■□□□□ 0.95
BEST1O76090 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST1O76090 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.99■□□□□ 0.95
BEST1O76090 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST1O76090 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BEST1O76090 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.99■□□□□ 0.95
BEST1O76090 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
BEST1O76090 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.99■□□□□ 0.95
BEST1O76090 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BEST1O76090 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.98■□□□□ 0.95
BEST1O76090 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BEST1O76090 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms