Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC066615.1-201ENST00000640911 628 ntBASIC19.31■□□□□ 0.68
CNOT3O75175 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT3O75175 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT3O75175 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT3O75175 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNOT3O75175 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.3■□□□□ 0.68
CNOT3O75175 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT3O75175 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT3O75175 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT3O75175 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT3O75175 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.3■□□□□ 0.68
CNOT3O75175 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT3O75175 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT3O75175 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
CNOT3O75175 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
CNOT3O75175 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT3O75175 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNOT3O75175 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 KRT18P29-201ENST00000397031 1267 ntBASIC19.29■□□□□ 0.68
CNOT3O75175 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CNOT3O75175 AC105020.6-201ENST00000621523 1217 ntBASIC19.29■□□□□ 0.68
CNOT3O75175 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNOT3O75175 FEM1AP1-201ENST00000431297 1995 ntBASIC19.29■□□□□ 0.68
CNOT3O75175 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CNOT3O75175 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNOT3O75175 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.29■□□□□ 0.68
CNOT3O75175 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT3O75175 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.28■□□□□ 0.68
CNOT3O75175 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CNOT3O75175 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 AC087289.5-201ENST00000586076 3175 ntBASIC19.28■□□□□ 0.68
CNOT3O75175 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT3O75175 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT3O75175 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CNOT3O75175 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CNOT3O75175 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT3O75175 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT3O75175 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT3O75175 AC098590.1-201ENST00000468126 897 ntBASIC19.27■□□□□ 0.68
CNOT3O75175 HLA-B-256ENST00000639848 1089 ntBASIC19.27■□□□□ 0.68
CNOT3O75175 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT3O75175 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT3O75175 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.27■□□□□ 0.68
CNOT3O75175 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.27■□□□□ 0.67
CNOT3O75175 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CNOT3O75175 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.27■□□□□ 0.67
CNOT3O75175 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNOT3O75175 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.27■□□□□ 0.67
CNOT3O75175 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms