Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 ESRRAP1-201ENST00000400596 1257 ntBASIC20.32■□□□□ 0.84
PRAMEF11O60813 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEF11O60813 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF11O60813 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 RPS2P52-201ENST00000469610 820 ntBASIC20.3■□□□□ 0.84
PRAMEF11O60813 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF11O60813 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF11O60813 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 POM121L13P-201ENST00000422362 380 ntBASIC20.29■□□□□ 0.84
PRAMEF11O60813 POU5F1P3-201ENST00000428824 1078 ntBASIC20.29■□□□□ 0.84
PRAMEF11O60813 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF11O60813 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF11O60813 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF11O60813 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 AC124283.5-201ENST00000624661 1809 ntBASIC20.28■□□□□ 0.84
PRAMEF11O60813 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF11O60813 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF11O60813 TSPY20P-201ENST00000450910 630 ntBASIC20.28■□□□□ 0.84
PRAMEF11O60813 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF11O60813 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF11O60813 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEF11O60813 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 AL691432.2-201ENST00000607222 2038 ntBASIC20.27■□□□□ 0.84
PRAMEF11O60813 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF11O60813 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms