Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX3O60493 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SNX3O60493 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 AC116050.2-201ENST00000612102 1779 ntBASIC19.69■□□□□ 0.74
SNX3O60493 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX3O60493 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX3O60493 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX3O60493 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 AC009237.14-201ENST00000609975 1594 ntBASIC19.69■□□□□ 0.74
SNX3O60493 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX3O60493 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX3O60493 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX3O60493 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 LTB4R2-202ENST00000528054 3092 ntBASIC19.68■□□□□ 0.74
SNX3O60493 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX3O60493 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SNX3O60493 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX3O60493 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNX3O60493 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX3O60493 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX3O60493 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX3O60493 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SNX3O60493 AC135050.7-201ENST00000624508 2218 ntBASIC19.67■□□□□ 0.74
SNX3O60493 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX3O60493 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SNX3O60493 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX3O60493 MIR3621-201ENST00000580529 85 ntBASIC19.67■□□□□ 0.74
SNX3O60493 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.67■□□□□ 0.74
SNX3O60493 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX3O60493 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNX3O60493 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX3O60493 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX3O60493 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX3O60493 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX3O60493 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX3O60493 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX3O60493 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SNX3O60493 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNX3O60493 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX3O60493 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX3O60493 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNX3O60493 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX3O60493 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX3O60493 AC018470.1-201ENST00000624790 3129 ntBASIC19.66■□□□□ 0.74
SNX3O60493 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX3O60493 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.65■□□□□ 0.74
SNX3O60493 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX3O60493 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX3O60493 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX3O60493 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX3O60493 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX3O60493 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX3O60493 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNX3O60493 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SNX3O60493 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX3O60493 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX3O60493 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.64■□□□□ 0.74
SNX3O60493 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX3O60493 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.64■□□□□ 0.74
SNX3O60493 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX3O60493 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX3O60493 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.64■□□□□ 0.74
SNX3O60493 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SNX3O60493 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms