Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.29■□□□□ 0.2
SSSCA1O60232 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSSCA1O60232 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSSCA1O60232 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSSCA1O60232 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.29■□□□□ 0.2
SSSCA1O60232 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
SSSCA1O60232 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSSCA1O60232 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.28■□□□□ 0.2
SSSCA1O60232 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.28■□□□□ 0.2
SSSCA1O60232 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSSCA1O60232 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.28■□□□□ 0.2
SSSCA1O60232 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSSCA1O60232 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSSCA1O60232 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.28■□□□□ 0.2
SSSCA1O60232 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.28■□□□□ 0.2
SSSCA1O60232 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 AC116050.2-201ENST00000612102 1779 ntBASIC16.28■□□□□ 0.2
SSSCA1O60232 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSSCA1O60232 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.27■□□□□ 0.2
SSSCA1O60232 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SSSCA1O60232 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SSSCA1O60232 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.27■□□□□ 0.2
SSSCA1O60232 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.27■□□□□ 0.2
SSSCA1O60232 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SSSCA1O60232 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSSCA1O60232 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.27■□□□□ 0.2
SSSCA1O60232 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSSCA1O60232 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SSSCA1O60232 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SSSCA1O60232 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SSSCA1O60232 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SSSCA1O60232 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 Z82202.1-201ENST00000623446 1880 ntBASIC16.27■□□□□ 0.19
SSSCA1O60232 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SSSCA1O60232 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSSCA1O60232 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.26■□□□□ 0.19
SSSCA1O60232 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSSCA1O60232 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.26■□□□□ 0.19
SSSCA1O60232 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.26■□□□□ 0.19
SSSCA1O60232 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.26■□□□□ 0.19
SSSCA1O60232 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.26■□□□□ 0.19
SSSCA1O60232 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 NEFHP1-201ENST00000412845 2629 ntBASIC16.26■□□□□ 0.19
SSSCA1O60232 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.26■□□□□ 0.19
SSSCA1O60232 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSSCA1O60232 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.26■□□□□ 0.19
SSSCA1O60232 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.25■□□□□ 0.19
SSSCA1O60232 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSSCA1O60232 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 TSPY26P-201ENST00000476365 1326 ntBASIC16.25■□□□□ 0.19
SSSCA1O60232 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SSSCA1O60232 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.25■□□□□ 0.19
SSSCA1O60232 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.25■□□□□ 0.19
SSSCA1O60232 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.25■□□□□ 0.19
SSSCA1O60232 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SSSCA1O60232 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.25■□□□□ 0.19
SSSCA1O60232 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSSCA1O60232 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSSCA1O60232 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms