Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFA1O15239 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFA1O15239 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NDUFA1O15239 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFA1O15239 POU5F1P4-201ENST00000413175 1085 ntBASIC13.65□□□□□ -0.22
NDUFA1O15239 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 AC120498.10-201ENST00000621827 505 ntBASIC13.65□□□□□ -0.22
NDUFA1O15239 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFA1O15239 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFA1O15239 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFA1O15239 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NDUFA1O15239 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NDUFA1O15239 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA1O15239 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NDUFA1O15239 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.64□□□□□ -0.23
NDUFA1O15239 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.64□□□□□ -0.23
NDUFA1O15239 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA1O15239 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA1O15239 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.64□□□□□ -0.23
NDUFA1O15239 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.64□□□□□ -0.23
NDUFA1O15239 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NDUFA1O15239 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFA1O15239 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 Z82202.1-201ENST00000623446 1880 ntBASIC13.63□□□□□ -0.23
NDUFA1O15239 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA1O15239 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFA1O15239 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NDUFA1O15239 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 AC093503.3-201ENST00000624917 2352 ntBASIC13.63□□□□□ -0.23
NDUFA1O15239 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFA1O15239 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms